Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC162PA2VCL2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC162PA2VCL2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC162PA2VCL2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC162PA2VCL2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 AC018553.1-201ENST00000616682 1458 ntBASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 AC124283.5-201ENST00000624661 1809 ntBASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC162PA2VCL2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms