Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RPS2P52-201ENST00000469610 820 ntBASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 UNC93B4-201ENST00000505679 747 ntBASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 GCSHP5-201ENST00000443090 522 ntBASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 AC098590.1-201ENST00000468126 897 ntBASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 SOX15-203ENST00000570788 1093 ntBASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV4S1A1TA0A5B7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.86■□□□□ 0.13
TCRBV4S1A1TA0A5B7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 AL356652.1-201ENST00000615962 565 ntBASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV4S1A1TA0A5B7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms