Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 IRS3P-201ENST00000223076 1006 ntBASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 AC097381.1-201ENST00000429019 1296 ntBASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 AP001330.3-201ENST00000520123 633 ntBASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV3S1A0A5B6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 KRT18P20-201ENST00000548986 1279 ntBASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 AP001160.3-201ENST00000601484 763 ntBASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.49■□□□□ 0.55
TCRBV3S1A0A5B6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 RASA4CP-201ENST00000424092 1398 ntBASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TCRBV3S1A0A5B6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms