Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 AC093484.2-201ENST00000580996 2166 ntBASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 PCDHB18P-201ENST00000524813 2368 ntBASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 AL162727.3-201ENST00000635661 2787 ntBASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM238LA0A1B0GVL6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM238LA0A1B0GVL6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.83□□□□□ -0.19
TMEM238LA0A1B0GVL6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM238LA0A1B0GVL6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM238LA0A1B0GVL6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM238LA0A1B0GVL6 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
TMEM238LA0A1B0GVL6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
TMEM238LA0A1B0GVL6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.83□□□□□ -0.19
TMEM238LA0A1B0GVL6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 AP000997.3-201ENST00000623333 2250 ntBASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 AL390961.4-201ENST00000623958 2535 ntBASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 AC007029.1-201ENST00000604183 313 ntBASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 AC100803.2-201ENST00000562459 1963 ntBASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.83□□□□□ -0.2
TMEM238LA0A1B0GVL6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 GAK-223ENST00000628912 497 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM238LA0A1B0GVL6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms