Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 FEM1AP4-201ENST00000443167 1987 ntBASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LOC102724428A0A0B4J2F2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC25.28■■□□□ 1.64
LOC102724428A0A0B4J2F2 TSPY5P-201ENST00000426936 936 ntBASIC25.28■■□□□ 1.64
LOC102724428A0A0B4J2F2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC25.28■■□□□ 1.64
LOC102724428A0A0B4J2F2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC25.28■■□□□ 1.64
LOC102724428A0A0B4J2F2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
LOC102724428A0A0B4J2F2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LOC102724428A0A0B4J2F2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LOC102724428A0A0B4J2F2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
LOC102724428A0A0B4J2F2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LOC102724428A0A0B4J2F2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LOC102724428A0A0B4J2F2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 SLC25A1P2-201ENST00000430693 912 ntBASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 CCR12P-201ENST00000446203 998 ntBASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 FAM207BP-201ENST00000447172 505 ntBASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.27■■□□□ 1.64
LOC102724428A0A0B4J2F2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LOC102724428A0A0B4J2F2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LOC102724428A0A0B4J2F2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC25.26■■□□□ 1.63
LOC102724428A0A0B4J2F2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LOC102724428A0A0B4J2F2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.26■■□□□ 1.63
LOC102724428A0A0B4J2F2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
LOC102724428A0A0B4J2F2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LOC102724428A0A0B4J2F2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LOC102724428A0A0B4J2F2 CD70-202ENST00000423145 881 ntTSL 2 BASIC25.26■■□□□ 1.63
LOC102724428A0A0B4J2F2 AC007663.1-201ENST00000438948 1240 ntBASIC25.26■■□□□ 1.63
LOC102724428A0A0B4J2F2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LOC102724428A0A0B4J2F2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LOC102724428A0A0B4J2F2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC25.26■■□□□ 1.63
LOC102724428A0A0B4J2F2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LOC102724428A0A0B4J2F2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LOC102724428A0A0B4J2F2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
LOC102724428A0A0B4J2F2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LOC102724428A0A0B4J2F2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
LOC102724428A0A0B4J2F2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LOC102724428A0A0B4J2F2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC25.25■■□□□ 1.63
LOC102724428A0A0B4J2F2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
LOC102724428A0A0B4J2F2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC25.25■■□□□ 1.63
LOC102724428A0A0B4J2F2 COX11P1-201ENST00000489116 835 ntBASIC25.25■■□□□ 1.63
LOC102724428A0A0B4J2F2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
LOC102724428A0A0B4J2F2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC25.25■■□□□ 1.63
LOC102724428A0A0B4J2F2 AC010653.2-201ENST00000623505 997 ntBASIC25.25■■□□□ 1.63
LOC102724428A0A0B4J2F2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
LOC102724428A0A0B4J2F2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LOC102724428A0A0B4J2F2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 AC092338.2-201ENST00000568827 1415 ntBASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 AP000550.4-202ENST00000639755 178 ntBASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 AL117328.2-201ENST00000624617 1940 ntBASIC25.24■■□□□ 1.63
LOC102724428A0A0B4J2F2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 PHGDH-210ENST00000641115 1638 ntBASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 AC009947.2-201ENST00000444014 672 ntBASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 KRT18P56-201ENST00000507275 550 ntBASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms