Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC231657.2-201ENST00000624556 255 ntBASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 TERF1P5-201ENST00000477545 1207 ntBASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC092720.2-201ENST00000602388 1665 ntBASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 TNXA-203ENST00000507684 2038 ntBASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 CDV3P1-201ENST00000471403 739 ntBASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 RBM17P2-201ENST00000616397 1405 ntBASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms