Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 ZNF473-202ENST00000391821 4715 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 CSE1L-202ENST00000396192 3459 ntTSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 VPS45-201ENST00000369128 2224 ntTSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 LINC02170-202ENST00000562231 2218 ntTSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 CYP11B2-201ENST00000323110 2936 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 RHD-201ENST00000328664 2930 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 TAF2-201ENST00000378164 5048 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 CES5A-208ENST00000541580 1669 ntTSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 RAD52-204ENST00000430095 2366 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 PTPN7-201ENST00000309017 3765 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 ITGB1-202ENST00000396033 3784 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 GOLGA3-207ENST00000545875 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 CFAP69-201ENST00000389297 3902 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 SULF2-206ENST00000467815 3905 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 COL25A1-202ENST00000399127 2500 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 CCDC81-202ENST00000445632 2528 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 PABPC1P6-201ENST00000445594 1829 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 HNRNPR-202ENST00000374612 2694 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 HNRNPR-203ENST00000374616 2691 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 KCNA2-202ENST00000369770 1959 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 ZBTB1-203ENST00000554015 2825 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 KDM2A-201ENST00000308783 3666 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 OSBP2-204ENST00000407373 3669 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 HS6ST3-202ENST00000620595 7073 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 MLN-201ENST00000266003 527 ntTSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 AL356292.1-201ENST00000283110 373 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 TMEM55A-201ENST00000285419 2970 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 TMOD4-201ENST00000295314 1267 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 S100P-201ENST00000296370 1279 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 PRDX2-201ENST00000301522 987 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 RPAP1-201ENST00000304330 4665 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 OR2AG1-201ENST00000307401 998 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 HBG2-201ENST00000336906 602 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 GSTM1-202ENST00000349334 1028 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 FTLP6-201ENST00000355274 422 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 Y_RNA.10-201ENST00000362371 110 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 Y_RNA.120-201ENST00000363304 110 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 RNA5SP234-201ENST00000363916 119 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 RN7SKP193-201ENST00000364488 306 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 ITLN2-201ENST00000368029 1151 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 JPT2-202ENST00000382710 962 ntTSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 SNORA80B-201ENST00000383906 136 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 RNU6-643P-201ENST00000384018 107 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 MIR570-201ENST00000384917 97 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 IGHV3-38-201ENST00000390618 426 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 RNU6-700P-201ENST00000391043 107 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 SNORD78.2-201ENST00000391076 69 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 ATP5HP3-201ENST00000396994 486 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 CYTH4-202ENST00000402997 633 ntTSL 4 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 MIR320C1-201ENST00000408566 88 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 ERICH2-201ENST00000409885 601 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 RNU4-88P-201ENST00000411220 86 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 BX682237.1-201ENST00000415016 335 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 ACTR3-202ENST00000415792 676 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 OR11M1P-201ENST00000415975 895 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 BPI-202ENST00000417318 1082 ntTSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 AL158156.1-201ENST00000422509 473 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 FO393418.1-201ENST00000424761 510 ntTSL 4 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 AC146944.2-202ENST00000425529 658 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 AC137499.1-201ENST00000427602 88 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 WARS2P1-201ENST00000429678 537 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 AC073346.1-202ENST00000430610 544 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 HLCS-IT1-201ENST00000434195 531 ntTSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 AL118511.2-201ENST00000436739 311 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 CHCHD4P4-201ENST00000437690 327 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 AL513043.1-201ENST00000439124 535 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 LINC00313-206ENST00000441283 448 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 DAP3P1-201ENST00000441522 278 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 CD79A-202ENST00000444740 567 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 CHCHD3P3-201ENST00000446783 640 ntBASIC2.13□□□□□ -2.07
KRTAP4-4Q9BYR3 AC093582.1-201ENST00000447086 385 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms