RNA–Protein interactions for RNA: ENST00000384018.1

RNU6-643P-201, Transcript of RNA, U6 small nuclear 643, pseudogene, humanhuman

BASIC

Gene RNU6-643P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-643P-201ENST00000384018 AEBP2Q6ZN18 517 aaPredicted RBP14.23□□□□□ -0.13
RNU6-643P-201ENST00000384018 CHIC1Q5VXU3 224 aa13.36□□□□□ -0.27
RNU6-643P-201ENST00000384018 SENP3Q9H4L4 574 aaPredicted RBP12.13□□□□□ -0.47
RNU6-643P-201ENST00000384018 PHF23Q9BUL5 403 aaPredicted RBP11.95□□□□□ -0.5
RNU6-643P-201ENST00000384018 FOXD1Q16676 465 aa11.33□□□□□ -0.6
RNU6-643P-201ENST00000384018 MSH5O43196 834 aa10.64□□□□□ -0.71
RNU6-643P-201ENST00000384018 POTEDQ86YR6 584 aa10.64□□□□□ -0.71
RNU6-643P-201ENST00000384018 PLPPR3Q6T4P5 718 aa10.6□□□□□ -0.71
RNU6-643P-201ENST00000384018 PIAS4Q8N2W9 510 aaPredicted RBP10.56□□□□□ -0.72
RNU6-643P-201ENST00000384018 PPP6R1Q9UPN7 881 aa10.49□□□□□ -0.73
RNU6-643P-201ENST00000384018 ADRA2BP18089 450 aa10.44□□□□□ -0.74
RNU6-643P-201ENST00000384018 MAPK8IP2Q13387 824 aaPredicted RBP9.64□□□□□ -0.87
RNU6-643P-201ENST00000384018 DMRT2Q9Y5R5 561 aa9.6□□□□□ -0.87
RNU6-643P-201ENST00000384018 SCAF1Q9H7N4 1312 aaKnown RBP9.52□□□□□ -0.89
RNU6-643P-201ENST00000384018 PPP4R3CPQ6ZMV5 832 aa9.27□□□□□ -0.93
RNU6-643P-201ENST00000384018 CACNB1Q02641 598 aaPredicted RBP9.22□□□□□ -0.93
RNU6-643P-201ENST00000384018 DCAF8L1A6NGE4 600 aa9.21□□□□□ -0.94
RNU6-643P-201ENST00000384018 HOXD11P31277 338 aaPredicted RBP9.19□□□□□ -0.94
RNU6-643P-201ENST00000384018 CNKSR2Q8WXI2 1034 aa9.13□□□□□ -0.95
RNU6-643P-201ENST00000384018 RNF216Q9NWF9 866 aaPredicted RBP9.09□□□□□ -0.95
RNU6-643P-201ENST00000384018 RNF39Q9H2S5 420 aa9.08□□□□□ -0.96
RNU6-643P-201ENST00000384018 C1QBPQ07021 282 aaKnown RBP8.92□□□□□ -0.98
RNU6-643P-201ENST00000384018 DNAJC5BQ9UF47 199 aa8.89□□□□□ -0.99
RNU6-643P-201ENST00000384018 NCBP3Q53F19 620 aaKnown RBP8.86□□□□□ -0.99
RNU6-643P-201ENST00000384018 NPM3O75607 178 aaKnown RBP8.76□□□□□ -1.01
RNU6-643P-201ENST00000384018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.75□□□□□ -1.01
RNU6-643P-201ENST00000384018 U3KPZ7 1027 aaPredicted RBP8.57□□□□□ -1.04
RNU6-643P-201ENST00000384018 SPINK5Q9NQ38 1064 aaPredicted RBP8.49□□□□□ -1.05
RNU6-643P-201ENST00000384018 KCNA4P22459 653 aa8.48□□□□□ -1.05
RNU6-643P-201ENST00000384018 CAPN15O75808 1086 aa8.46□□□□□ -1.06
RNU6-643P-201ENST00000384018 DSG3P32926 999 aa8.46□□□□□ -1.06
RNU6-643P-201ENST00000384018 SLC4A2P04920 1241 aa8.41□□□□□ -1.06
RNU6-643P-201ENST00000384018 POTEHQ6S545 545 aa8.31□□□□□ -1.08
RNU6-643P-201ENST00000384018 TRHP20396 242 aaPredicted RBP8.3□□□□□ -1.08
RNU6-643P-201ENST00000384018 ABCB7O75027 752 aa8.28□□□□□ -1.08
RNU6-643P-201ENST00000384018 APLP2Q06481 763 aa8.28□□□□□ -1.08
RNU6-643P-201ENST00000384018 ZNF219Q9P2Y4 722 aaPredicted RBP8.28□□□□□ -1.08
RNU6-643P-201ENST00000384018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.25□□□□□ -1.09
RNU6-643P-201ENST00000384018 HNRNPUL2Q1KMD3 747 aaKnown RBP8.25□□□□□ -1.09
RNU6-643P-201ENST00000384018 SAMD1Q6SPF0 538 aaPredicted RBP8.2□□□□□ -1.1
RNU6-643P-201ENST00000384018 MYCNP04198 464 aaPredicted RBP8.1□□□□□ -1.11
RNU6-643P-201ENST00000384018 RBM42Q9BTD8 480 aaKnown RBP8.06□□□□□ -1.12
RNU6-643P-201ENST00000384018 POLA2Q14181 598 aa8.03□□□□□ -1.12
RNU6-643P-201ENST00000384018 SLC4A1APQ9BWU0 796 aaKnown RBP7.96□□□□□ -1.14
RNU6-643P-201ENST00000384018 CHRDL2Q6WN34 429 aa7.95□□□□□ -1.14
RNU6-643P-201ENST00000384018 FOXD4L1Q9NU39 408 aa7.95□□□□□ -1.14
RNU6-643P-201ENST00000384018 ATF5Q9Y2D1 282 aaPredicted RBP7.94□□□□□ -1.14
RNU6-643P-201ENST00000384018 ZBTB12Q9Y330 459 aaPredicted RBP7.86□□□□□ -1.15
RNU6-643P-201ENST00000384018 AKT1S1Q96B36 256 aa7.85□□□□□ -1.15
RNU6-643P-201ENST00000384018 OSCARQ8IYS5 282 aa7.82□□□□□ -1.16
RNU6-643P-201ENST00000384018 ZBTB22O15209 634 aa7.81□□□□□ -1.16
RNU6-643P-201ENST00000384018 REM2Q8IYK8 340 aaPredicted RBP7.78□□□□□ -1.16
RNU6-643P-201ENST00000384018 PIP4P2Q8N4L2 257 aa7.74□□□□□ -1.17
RNU6-643P-201ENST00000384018 SP7Q8TDD2 431 aaPredicted RBP7.72□□□□□ -1.17
RNU6-643P-201ENST00000384018 PITPNM1O00562 1244 aa7.71□□□□□ -1.18
RNU6-643P-201ENST00000384018 ATXN8OSP0DMR3 200 aa7.69□□□□□ -1.18
RNU6-643P-201ENST00000384018 FXR2P51116 673 aaKnown RBP eCLIP7.66□□□□□ -1.18
RNU6-643P-201ENST00000384018 SPDYE2BA6NHP3 402 aa7.62□□□□□ -1.19
RNU6-643P-201ENST00000384018 SPDYE6P0CI01 402 aa7.62□□□□□ -1.19
RNU6-643P-201ENST00000384018 SPDYE2Q495Y8 402 aa7.62□□□□□ -1.19
RNU6-643P-201ENST00000384018 HAX1O00165 279 aa7.61□□□□□ -1.19
RNU6-643P-201ENST00000384018 FBLN2P98095 1184 aa7.61□□□□□ -1.19
RNU6-643P-201ENST00000384018 MKRN4PQ13434 485 aaPredicted RBP7.57□□□□□ -1.2
RNU6-643P-201ENST00000384018 EVX2Q03828 476 aa7.52□□□□□ -1.21
RNU6-643P-201ENST00000384018 SSUH2Q9Y2M2 353 aa7.52□□□□□ -1.21
RNU6-643P-201ENST00000384018 SPDYE1Q8NFV5 336 aaPredicted RBP7.51□□□□□ -1.21
RNU6-643P-201ENST00000384018 CLEC11AQ9Y240 323 aa7.51□□□□□ -1.21
RNU6-643P-201ENST00000384018 PRKAR2AP13861 404 aaKnown RBP7.5□□□□□ -1.21
RNU6-643P-201ENST00000384018 ZNF692Q9BU19 519 aaPredicted RBP7.49□□□□□ -1.21
RNU6-643P-201ENST00000384018 C19orf67A6NJJ6 358 aa7.42□□□□□ -1.22
RNU6-643P-201ENST00000384018 CHADLQ6NUI6 762 aa7.4□□□□□ -1.22
RNU6-643P-201ENST00000384018 PABPN1Q86U42 306 aaKnown RBP eCLIP7.39□□□□□ -1.23
RNU6-643P-201ENST00000384018 PRR29P0C7W0 189 aa7.36□□□□□ -1.23
RNU6-643P-201ENST00000384018 GABBR2O75899 941 aa7.34□□□□□ -1.23
RNU6-643P-201ENST00000384018 CSRNP3Q8WYN3 585 aa7.3□□□□□ -1.24
RNU6-643P-201ENST00000384018 CD44P16070 742 aaKnown RBP7.26□□□□□ -1.25
RNU6-643P-201ENST00000384018 FARP1Q9Y4F1 1045 aaPredicted RBP7.26□□□□□ -1.25
RNU6-643P-201ENST00000384018 LHX8Q68G74 356 aa7.23□□□□□ -1.25
RNU6-643P-201ENST00000384018 POTEIP0CG38 1075 aa7.2□□□□□ -1.26
RNU6-643P-201ENST00000384018 CREBZFQ9NS37 354 aa7.17□□□□□ -1.26
RNU6-643P-201ENST00000384018 CLCN6P51797 869 aa7.15□□□□□ -1.26
RNU6-643P-201ENST00000384018 ZNF579Q8NAF0 562 aaKnown RBP7.15□□□□□ -1.26
RNU6-643P-201ENST00000384018 EHMT2Q96KQ7 1210 aa7.15□□□□□ -1.26
RNU6-643P-201ENST00000384018 STAG3Q9UJ98 1225 aa7.14□□□□□ -1.27
RNU6-643P-201ENST00000384018 SPDYE4A6NLX3 237 aa7.12□□□□□ -1.27
RNU6-643P-201ENST00000384018 ZRANB1Q9UGI0 708 aa7.12□□□□□ -1.27
RNU6-643P-201ENST00000384018 DCBLD2Q96PD2 775 aa7.11□□□□□ -1.27
RNU6-643P-201ENST00000384018 GALR2O43603 387 aaPredicted RBP7.07□□□□□ -1.28
RNU6-643P-201ENST00000384018 PHF12Q96QT6 1004 aa7.04□□□□□ -1.28
RNU6-643P-201ENST00000384018 PAK3O75914 559 aaPredicted RBP7.03□□□□□ -1.28
RNU6-643P-201ENST00000384018 MNX1P50219 401 aaPredicted RBP7.02□□□□□ -1.29
RNU6-643P-201ENST00000384018 NPM1P06748 294 aaKnown RBP eCLIP7□□□□□ -1.29
RNU6-643P-201ENST00000384018 POTEB2H3BUK9 544 aa6.96□□□□□ -1.3
RNU6-643P-201ENST00000384018 OTUD5Q96G74 571 aa6.96□□□□□ -1.3
RNU6-643P-201ENST00000384018 PROM2Q8N271 834 aa6.95□□□□□ -1.3
RNU6-643P-201ENST00000384018 PELP1Q8IZL8 1130 aaKnown RBP6.94□□□□□ -1.3
RNU6-643P-201ENST00000384018 MS4A3Q96HJ5 214 aa6.94□□□□□ -1.3
RNU6-643P-201ENST00000384018 ASTLQ6HA08 431 aaPredicted RBP6.91□□□□□ -1.3
RNU6-643P-201ENST00000384018 ATMINO43313 823 aaPredicted RBP6.89□□□□□ -1.31
RNU6-643P-201ENST00000384018 TSPYL2Q9H2G4 693 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms