Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC10.55□□□□□ -0.72
SMARCA4P51532 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SMARCA4P51532 AC105749.1-201ENST00000631338 2008 ntBASIC10.55□□□□□ -0.72
SMARCA4P51532 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SMARCA4P51532 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC10.55□□□□□ -0.72
SMARCA4P51532 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SMARCA4P51532 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SMARCA4P51532 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SMARCA4P51532 AL109941.1-201ENST00000401925 229 ntBASIC10.55□□□□□ -0.72
SMARCA4P51532 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC10.55□□□□□ -0.72
SMARCA4P51532 AC005033.1-201ENST00000428904 813 ntBASIC10.55□□□□□ -0.72
SMARCA4P51532 AL022237.1-201ENST00000446663 358 ntBASIC10.55□□□□□ -0.72
SMARCA4P51532 RPS4XP1-201ENST00000482189 787 ntBASIC10.55□□□□□ -0.72
SMARCA4P51532 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SMARCA4P51532 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC10.55□□□□□ -0.72
SMARCA4P51532 CDH12P4-201ENST00000517835 295 ntBASIC10.55□□□□□ -0.72
SMARCA4P51532 CDH12P3-201ENST00000517935 295 ntBASIC10.55□□□□□ -0.72
SMARCA4P51532 CDH12P1-201ENST00000518435 295 ntBASIC10.55□□□□□ -0.72
SMARCA4P51532 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC10.55□□□□□ -0.72
SMARCA4P51532 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC10.55□□□□□ -0.72
SMARCA4P51532 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC10.55□□□□□ -0.72
SMARCA4P51532 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SMARCA4P51532 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
SMARCA4P51532 ITPK1-AS1-201ENST00000553639 4701 ntBASIC10.54□□□□□ -0.72
SMARCA4P51532 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SMARCA4P51532 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
SMARCA4P51532 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMARCA4P51532 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMARCA4P51532 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMARCA4P51532 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMARCA4P51532 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMARCA4P51532 AC105342.1-201ENST00000378334 6848 ntBASIC10.54□□□□□ -0.72
SMARCA4P51532 RNU1-106P-201ENST00000384382 164 ntBASIC10.54□□□□□ -0.72
SMARCA4P51532 AC005042.1-201ENST00000393397 800 ntBASIC10.54□□□□□ -0.72
SMARCA4P51532 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMARCA4P51532 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC10.54□□□□□ -0.72
SMARCA4P51532 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC10.54□□□□□ -0.72
SMARCA4P51532 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC10.54□□□□□ -0.72
SMARCA4P51532 RPL7AP6-201ENST00000477943 801 ntBASIC10.54□□□□□ -0.72
SMARCA4P51532 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC10.54□□□□□ -0.72
SMARCA4P51532 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SMARCA4P51532 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC10.54□□□□□ -0.72
SMARCA4P51532 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC10.54□□□□□ -0.72
SMARCA4P51532 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC10.54□□□□□ -0.72
SMARCA4P51532 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC10.54□□□□□ -0.72
SMARCA4P51532 BX322650.1-201ENST00000332359 2143 ntBASIC10.54□□□□□ -0.72
SMARCA4P51532 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC10.54□□□□□ -0.72
SMARCA4P51532 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SMARCA4P51532 UGT2B27P-201ENST00000505092 1620 ntBASIC10.53□□□□□ -0.72
SMARCA4P51532 AL139805.2-201ENST00000455305 2433 ntBASIC10.53□□□□□ -0.72
SMARCA4P51532 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC10.53□□□□□ -0.72
SMARCA4P51532 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SMARCA4P51532 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SMARCA4P51532 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SMARCA4P51532 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SMARCA4P51532 HMGA1P8-201ENST00000414130 321 ntBASIC10.53□□□□□ -0.72
SMARCA4P51532 OR52B5P-201ENST00000435337 951 ntBASIC10.53□□□□□ -0.72
SMARCA4P51532 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC10.53□□□□□ -0.72
SMARCA4P51532 VDAC2P4-201ENST00000452925 711 ntBASIC10.53□□□□□ -0.72
SMARCA4P51532 AC004129.2-201ENST00000457229 287 ntBASIC10.53□□□□□ -0.72
SMARCA4P51532 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SMARCA4P51532 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC10.53□□□□□ -0.72
SMARCA4P51532 RPEP1-201ENST00000504507 658 ntBASIC10.53□□□□□ -0.72
SMARCA4P51532 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC10.53□□□□□ -0.72
SMARCA4P51532 AC139365.2-201ENST00000517972 253 ntBASIC10.53□□□□□ -0.72
SMARCA4P51532 LDHC-203ENST00000535809 757 ntTSL 5 BASIC10.53□□□□□ -0.72
SMARCA4P51532 LDHC-205ENST00000537486 583 ntTSL 5 BASIC10.53□□□□□ -0.72
SMARCA4P51532 AC244502.2-201ENST00000543361 851 ntBASIC10.53□□□□□ -0.72
SMARCA4P51532 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC10.53□□□□□ -0.72
SMARCA4P51532 OR52B5P-202ENST00000641118 1110 ntBASIC10.53□□□□□ -0.72
SMARCA4P51532 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC10.53□□□□□ -0.72
SMARCA4P51532 CD86-204ENST00000469710 1604 ntTSL 2 BASIC10.53□□□□□ -0.72
SMARCA4P51532 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
SMARCA4P51532 AL355377.1-201ENST00000621125 1653 ntBASIC10.52□□□□□ -0.72
SMARCA4P51532 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SMARCA4P51532 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SMARCA4P51532 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
SMARCA4P51532 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SMARCA4P51532 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC10.52□□□□□ -0.73
SMARCA4P51532 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC10.52□□□□□ -0.73
SMARCA4P51532 AC103563.5-201ENST00000455643 364 ntBASIC10.52□□□□□ -0.73
SMARCA4P51532 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC10.52□□□□□ -0.73
SMARCA4P51532 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
SMARCA4P51532 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC10.52□□□□□ -0.73
SMARCA4P51532 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC10.52□□□□□ -0.73
SMARCA4P51532 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
SMARCA4P51532 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC10.52□□□□□ -0.73
SMARCA4P51532 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.73
SMARCA4P51532 AC023421.1-201ENST00000590535 1785 ntBASIC10.52□□□□□ -0.73
SMARCA4P51532 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SMARCA4P51532 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SMARCA4P51532 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC10.51□□□□□ -0.73
SMARCA4P51532 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SMARCA4P51532 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC10.51□□□□□ -0.73
SMARCA4P51532 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC10.51□□□□□ -0.73
SMARCA4P51532 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC10.51□□□□□ -0.73
SMARCA4P51532 MIR6837-201ENST00000620884 64 ntBASIC10.51□□□□□ -0.73
SMARCA4P51532 SELE-203ENST00000367775 3389 ntTSL 5 BASIC10.51□□□□□ -0.73
SMARCA4P51532 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SMARCA4P51532 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms