Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXC12P31275 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
HOXC12P31275 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 SNORA73B-201ENST00000363217 204 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HOXC12P31275 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXC12P31275 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HOXC12P31275 PTMAP8-201ENST00000397729 342 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXC12P31275 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXC12P31275 AC004986.1-201ENST00000414855 607 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 AC023141.10-201ENST00000415634 200 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXC12P31275 EEF1GP7-201ENST00000422983 703 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.62□□□□□ -1.35
HOXC12P31275 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HOXC12P31275 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXC12P31275 MTND5P2-201ENST00000442927 1142 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXC12P31275 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXC12P31275 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXC12P31275 AL390026.1-201ENST00000456647 457 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 AC236972.4-201ENST00000458091 963 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 CREM-224ENST00000468236 582 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXC12P31275 MTND3P7-201ENST00000474435 343 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 H3F3AP5-201ENST00000475267 429 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 AC005550.2-201ENST00000476382 318 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 AC108734.3-201ENST00000481241 1165 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 AF305872.1-201ENST00000485217 471 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 AL079303.1-201ENST00000486611 463 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXC12P31275 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXC12P31275 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXC12P31275 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 BTG4P1-201ENST00000510421 183 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 AC016559.1-201ENST00000511420 199 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXC12P31275 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXC12P31275 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
HOXC12P31275 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXC12P31275 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXC12P31275 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXC12P31275 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXC12P31275 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXC12P31275 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXC12P31275 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
HOXC12P31275 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXC12P31275 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 AL049840.5-201ENST00000602827 552 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 CUX2P1-201ENST00000606426 298 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 AC135507.1-201ENST00000607214 561 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXC12P31275 AL354976.1-201ENST00000613843 387 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 AP004607.9-201ENST00000618202 316 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXC12P31275 AC009120.7-201ENST00000623452 780 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 AC073488.8-201ENST00000631952 757 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXC12P31275 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXC12P31275 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HOXC12P31275 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 AL359396.1-201ENST00000623151 2376 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
HOXC12P31275 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HOXC12P31275 MFSD8-227ENST00000641393 4069 ntBASIC6.62□□□□□ -1.35
HOXC12P31275 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXC12P31275 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HOXC12P31275 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC6.62□□□□□ -1.35
HOXC12P31275 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXC12P31275 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HOXC12P31275 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC12P31275 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXC12P31275 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HOXC12P31275 AL049737.1-201ENST00000413920 1403 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
HOXC12P31275 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 AL357556.1-201ENST00000421884 1388 ntBASIC6.61□□□□□ -1.35
HOXC12P31275 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXC12P31275 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC12P31275 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms