Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 MTHFD1P1-201ENST00000413059 2764 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AC104964.2-201ENST00000562242 4641 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AL121657.1-201ENST00000327215 531 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 SNORA30-201ENST00000384028 129 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 RNU6-253P-201ENST00000384730 105 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AC093719.1-202ENST00000392735 373 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 CAV1-204ENST00000393470 598 ntTSL 4 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 SNORA11D-201ENST00000408548 128 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 SNORA11E-201ENST00000408778 128 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 METTL5-204ENST00000409340 472 ntTSL 5 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 LINC01347-201ENST00000417964 355 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 EIF4A1P2-201ENST00000422633 1220 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 SNX18P3-201ENST00000424993 835 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 FGF12-202ENST00000430714 603 ntTSL 2 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 ARL6IP1P2-201ENST00000431356 563 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 BX119917.1-201ENST00000432517 502 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 RPS10P14-201ENST00000440748 502 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AC013399.1-201ENST00000450311 418 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AL590326.1-201ENST00000460857 334 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 RPS7P10-201ENST00000464254 603 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 RN7SL836P-201ENST00000476140 296 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 NPM1P6-201ENST00000521088 871 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 SMARCE1P4-201ENST00000523647 241 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AC118273.2-201ENST00000532092 465 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 OR4A43P-201ENST00000532938 908 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 FAM30C-201ENST00000561158 410 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 CASC22-202ENST00000628396 802 ntTSL 5 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 AL133279.3-201ENST00000563140 2352 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 OR4C1P-202ENST00000641065 1569 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 OFD1P15Y-201ENST00000411536 1392 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 MAPK10-343ENST00000641677 2546 ntBASIC8.22□□□□□ -1.09
RNF135Q8IUD6 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC8.22□□□□□ -1.09
RNF135Q8IUD6 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
RNF135Q8IUD6 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
RNF135Q8IUD6 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
RNF135Q8IUD6 AC138393.1-206ENST00000540997 1886 ntBASIC8.21□□□□□ -1.09
RNF135Q8IUD6 AL031123.2-201ENST00000563225 3325 ntBASIC8.21□□□□□ -1.09
RNF135Q8IUD6 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
RNF135Q8IUD6 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.21□□□□□ -1.09
RNF135Q8IUD6 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC8.21□□□□□ -1.09
RNF135Q8IUD6 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC8.21□□□□□ -1.09
RNF135Q8IUD6 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
RNF135Q8IUD6 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
RNF135Q8IUD6 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC8.21□□□□□ -1.09
RNF135Q8IUD6 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
RNF135Q8IUD6 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
RNF135Q8IUD6 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.21□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms