RNA–Protein interactions for RNA: ENST00000557828.1

AC009269.4-201, humanhuman

TSL 3 BASIC

Gene AC009269.4, Length 440 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009269.4-201ENST00000557828 AEBP2Q6ZN18 517 aaPredicted RBP24.69■■□□□ 1.54
AC009269.4-201ENST00000557828 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.37
AC009269.4-201ENST00000557828 SENP3Q9H4L4 574 aaPredicted RBP20.85■□□□□ 0.93
AC009269.4-201ENST00000557828 PHF23Q9BUL5 403 aaPredicted RBP20.79■□□□□ 0.92
AC009269.4-201ENST00000557828 FOXD1Q16676 465 aa19.53■□□□□ 0.72
AC009269.4-201ENST00000557828 PLPPR3Q6T4P5 718 aa18.9■□□□□ 0.62
AC009269.4-201ENST00000557828 PPP6R1Q9UPN7 881 aa18.52■□□□□ 0.56
AC009269.4-201ENST00000557828 ADRA2BP18089 450 aa18.46■□□□□ 0.55
AC009269.4-201ENST00000557828 PIAS4Q8N2W9 510 aaPredicted RBP18.25■□□□□ 0.51
AC009269.4-201ENST00000557828 MSH5O43196 834 aa18.04■□□□□ 0.48
AC009269.4-201ENST00000557828 POTEDQ86YR6 584 aa17.32■□□□□ 0.36
AC009269.4-201ENST00000557828 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
AC009269.4-201ENST00000557828 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
AC009269.4-201ENST00000557828 PPP4R3CPQ6ZMV5 832 aa16.67■□□□□ 0.26
AC009269.4-201ENST00000557828 DMRT2Q9Y5R5 561 aa16.62■□□□□ 0.25
AC009269.4-201ENST00000557828 CNKSR2Q8WXI2 1034 aa16.24■□□□□ 0.19
AC009269.4-201ENST00000557828 HOXD11P31277 338 aaPredicted RBP16.1■□□□□ 0.17
AC009269.4-201ENST00000557828 RNF216Q9NWF9 866 aaPredicted RBP16.02■□□□□ 0.16
AC009269.4-201ENST00000557828 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
AC009269.4-201ENST00000557828 DCAF8L1A6NGE4 600 aa15.96■□□□□ 0.15
AC009269.4-201ENST00000557828 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
AC009269.4-201ENST00000557828 KCNA4P22459 653 aa15.83■□□□□ 0.12
AC009269.4-201ENST00000557828 RNF39Q9H2S5 420 aa15.49■□□□□ 0.07
AC009269.4-201ENST00000557828 CACNB1Q02641 598 aaPredicted RBP15.4■□□□□ 0.06
AC009269.4-201ENST00000557828 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
AC009269.4-201ENST00000557828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
AC009269.4-201ENST00000557828 C1QBPQ07021 282 aaKnown RBP15.21■□□□□ 0.03
AC009269.4-201ENST00000557828 SLC4A2P04920 1241 aa15.14■□□□□ 0.01
AC009269.4-201ENST00000557828 U3KPZ7 1027 aaPredicted RBP15.1■□□□□ 0.01
AC009269.4-201ENST00000557828 SLC4A1APQ9BWU0 796 aaKnown RBP14.93□□□□□ -0.02
AC009269.4-201ENST00000557828 SPINK5Q9NQ38 1064 aaPredicted RBP14.85□□□□□ -0.03
AC009269.4-201ENST00000557828 CAPN15O75808 1086 aa14.73□□□□□ -0.05
AC009269.4-201ENST00000557828 ZBTB22O15209 634 aa14.61□□□□□ -0.07
AC009269.4-201ENST00000557828 DSG3P32926 999 aa14.61□□□□□ -0.07
AC009269.4-201ENST00000557828 MYCNP04198 464 aaPredicted RBP14.6□□□□□ -0.07
AC009269.4-201ENST00000557828 FOXD4L1Q9NU39 408 aa14.6□□□□□ -0.07
AC009269.4-201ENST00000557828 TRHP20396 242 aaPredicted RBP14.59□□□□□ -0.07
AC009269.4-201ENST00000557828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.58□□□□□ -0.08
AC009269.4-201ENST00000557828 HNRNPUL2Q1KMD3 747 aaKnown RBP14.58□□□□□ -0.08
AC009269.4-201ENST00000557828 SAMD1Q6SPF0 538 aaPredicted RBP14.56□□□□□ -0.08
AC009269.4-201ENST00000557828 APLP2Q06481 763 aa14.5□□□□□ -0.09
AC009269.4-201ENST00000557828 ABCB7O75027 752 aa14.48□□□□□ -0.09
AC009269.4-201ENST00000557828 ZNF219Q9P2Y4 722 aaPredicted RBP14.45□□□□□ -0.1
AC009269.4-201ENST00000557828 ATF5Q9Y2D1 282 aaPredicted RBP14.42□□□□□ -0.1
AC009269.4-201ENST00000557828 POLA2Q14181 598 aa14.26□□□□□ -0.13
AC009269.4-201ENST00000557828 CSRNP3Q8WYN3 585 aa14.13□□□□□ -0.15
AC009269.4-201ENST00000557828 ATXN8OSP0DMR3 200 aa14.08□□□□□ -0.16
AC009269.4-201ENST00000557828 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
AC009269.4-201ENST00000557828 ZBTB12Q9Y330 459 aaPredicted RBP13.82□□□□□ -0.2
AC009269.4-201ENST00000557828 RBM42Q9BTD8 480 aaKnown RBP13.8□□□□□ -0.2
AC009269.4-201ENST00000557828 OSCARQ8IYS5 282 aa13.78□□□□□ -0.2
AC009269.4-201ENST00000557828 MKRN4PQ13434 485 aaPredicted RBP13.73□□□□□ -0.21
AC009269.4-201ENST00000557828 FBLN2P98095 1184 aa13.65□□□□□ -0.22
AC009269.4-201ENST00000557828 AKT1S1Q96B36 256 aa13.6□□□□□ -0.23
AC009269.4-201ENST00000557828 POTEHQ6S545 545 aa13.58□□□□□ -0.24
AC009269.4-201ENST00000557828 REM2Q8IYK8 340 aaPredicted RBP13.54□□□□□ -0.24
AC009269.4-201ENST00000557828 CHRDL2Q6WN34 429 aa13.5□□□□□ -0.25
AC009269.4-201ENST00000557828 SPDYE2BA6NHP3 402 aa13.48□□□□□ -0.25
AC009269.4-201ENST00000557828 SPDYE6P0CI01 402 aa13.48□□□□□ -0.25
AC009269.4-201ENST00000557828 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
AC009269.4-201ENST00000557828 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
AC009269.4-201ENST00000557828 PITPNM1O00562 1244 aa13.39□□□□□ -0.27
AC009269.4-201ENST00000557828 SSUH2Q9Y2M2 353 aa13.37□□□□□ -0.27
AC009269.4-201ENST00000557828 PIP4P2Q8N4L2 257 aa13.27□□□□□ -0.29
AC009269.4-201ENST00000557828 PABPN1Q86U42 306 aaKnown RBP eCLIP13.25□□□□□ -0.29
AC009269.4-201ENST00000557828 CLEC11AQ9Y240 323 aa13.23□□□□□ -0.29
AC009269.4-201ENST00000557828 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.29
AC009269.4-201ENST00000557828 SPDYE1Q8NFV5 336 aaPredicted RBP13.19□□□□□ -0.3
AC009269.4-201ENST00000557828 SPDYE4A6NLX3 237 aa13.13□□□□□ -0.31
AC009269.4-201ENST00000557828 PRKAR2AP13861 404 aaKnown RBP13.04□□□□□ -0.32
AC009269.4-201ENST00000557828 PRR29P0C7W0 189 aa13.01□□□□□ -0.33
AC009269.4-201ENST00000557828 CHADLQ6NUI6 762 aa13.01□□□□□ -0.33
AC009269.4-201ENST00000557828 HAX1O00165 279 aa12.95□□□□□ -0.34
AC009269.4-201ENST00000557828 EVX2Q03828 476 aa12.93□□□□□ -0.34
AC009269.4-201ENST00000557828 PROM2Q8N271 834 aa12.84□□□□□ -0.35
AC009269.4-201ENST00000557828 SP7Q8TDD2 431 aaPredicted RBP12.83□□□□□ -0.36
AC009269.4-201ENST00000557828 STAG3Q9UJ98 1225 aa12.82□□□□□ -0.36
AC009269.4-201ENST00000557828 CREBZFQ9NS37 354 aa12.8□□□□□ -0.36
AC009269.4-201ENST00000557828 C19orf67A6NJJ6 358 aa12.78□□□□□ -0.36
AC009269.4-201ENST00000557828 FARP1Q9Y4F1 1045 aaPredicted RBP12.77□□□□□ -0.37
AC009269.4-201ENST00000557828 FKBP8Q14318 412 aa12.76□□□□□ -0.37
AC009269.4-201ENST00000557828 CD44P16070 742 aaKnown RBP12.62□□□□□ -0.39
AC009269.4-201ENST00000557828 MNX1P50219 401 aaPredicted RBP12.62□□□□□ -0.39
AC009269.4-201ENST00000557828 GABBR2O75899 941 aa12.56□□□□□ -0.4
AC009269.4-201ENST00000557828 MIER1Q8N108 512 aa12.51□□□□□ -0.41
AC009269.4-201ENST00000557828 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
AC009269.4-201ENST00000557828 NPM1P06748 294 aaKnown RBP eCLIP12.46□□□□□ -0.41
AC009269.4-201ENST00000557828 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
AC009269.4-201ENST00000557828 PLCD3Q8N3E9 789 aa12.4□□□□□ -0.42
AC009269.4-201ENST00000557828 PHF12Q96QT6 1004 aa12.4□□□□□ -0.42
AC009269.4-201ENST00000557828 TSPYL2Q9H2G4 693 aaPredicted RBP12.36□□□□□ -0.43
AC009269.4-201ENST00000557828 POTEIP0CG38 1075 aa12.35□□□□□ -0.43
AC009269.4-201ENST00000557828 PAK3O75914 559 aaPredicted RBP12.34□□□□□ -0.43
AC009269.4-201ENST00000557828 GALR2O43603 387 aaPredicted RBP12.33□□□□□ -0.44
AC009269.4-201ENST00000557828 PLEKHG5O94827 1062 aa12.33□□□□□ -0.44
AC009269.4-201ENST00000557828 RASEFQ8IZ41 740 aa12.32□□□□□ -0.44
AC009269.4-201ENST00000557828 FBXO3Q9UK99 471 aa12.3□□□□□ -0.44
AC009269.4-201ENST00000557828 CLCN6P51797 869 aa12.26□□□□□ -0.45
AC009269.4-201ENST00000557828 CCDC61Q9Y6R9 512 aa12.26□□□□□ -0.45
AC009269.4-201ENST00000557828 NUBP1P53384 320 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms