RNA–Protein interactions for RNA: ENST00000617051.4

PCDH15-230, Transcript of protocadherin related 15, humanhuman

TSL 5 BASIC

Gene PCDH15, Length 7,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-230ENST00000617051 DCAF8L2P0C7V8 631 aa13.64□□□□□ -0.23
PCDH15-230ENST00000617051 FAM9AQ8IZU1 332 aaPredicted RBP12.82□□□□□ -0.36
PCDH15-230ENST00000617051 SUPT5HO00267 1087 aaKnown RBP12.55□□□□□ -0.4
PCDH15-230ENST00000617051 APLP2Q06481 763 aa12.53□□□□□ -0.4
PCDH15-230ENST00000617051 PELP1Q8IZL8 1130 aaKnown RBP12.52□□□□□ -0.41
PCDH15-230ENST00000617051 NISCHQ9Y2I1 1504 aa12.33□□□□□ -0.44
PCDH15-230ENST00000617051 SHROOM4Q9ULL8 1493 aa12.19□□□□□ -0.46
PCDH15-230ENST00000617051 EHMT2Q96KQ7 1210 aa12.17□□□□□ -0.46
PCDH15-230ENST00000617051 CCER1Q8TC90 406 aaPredicted RBP11.97□□□□□ -0.49
PCDH15-230ENST00000617051 ATP1B4Q9UN42 357 aaPredicted RBP11.96□□□□□ -0.49
PCDH15-230ENST00000617051 ERICH6Q7L0X2 663 aa11.85□□□□□ -0.51
PCDH15-230ENST00000617051 RANGAP1P46060 587 aaPredicted RBP11.84□□□□□ -0.51
PCDH15-230ENST00000617051 MYT1LQ9UL68 1186 aa11.83□□□□□ -0.52
PCDH15-230ENST00000617051 TTBK1Q5TCY1 1321 aaPredicted RBP11.77□□□□□ -0.53
PCDH15-230ENST00000617051 TRIM41Q8WV44 630 aa11.75□□□□□ -0.53
PCDH15-230ENST00000617051 UBTFP17480 764 aaKnown RBP11.74□□□□□ -0.53
PCDH15-230ENST00000617051 CENPBP07199 599 aaPredicted RBP11.69□□□□□ -0.54
PCDH15-230ENST00000617051 ZEB1P37275 1124 aaPredicted RBP11.69□□□□□ -0.54
PCDH15-230ENST00000617051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.68□□□□□ -0.54
PCDH15-230ENST00000617051 NEFLP07196 543 aa11.68□□□□□ -0.54
PCDH15-230ENST00000617051 HNRNPUL2Q1KMD3 747 aaKnown RBP11.68□□□□□ -0.54
PCDH15-230ENST00000617051 PCGF6Q9BYE7 350 aa11.64□□□□□ -0.55
PCDH15-230ENST00000617051 DAXXQ9UER7 740 aaPredicted RBP11.48□□□□□ -0.57
PCDH15-230ENST00000617051 CHIC1Q5VXU3 224 aa11.4□□□□□ -0.58
PCDH15-230ENST00000617051 POLR3GLQ9BT43 218 aa11.4□□□□□ -0.58
PCDH15-230ENST00000617051 SLC4A1APQ9BWU0 796 aaKnown RBP11.4□□□□□ -0.58
PCDH15-230ENST00000617051 ITGAEP38570 1179 aa11.29□□□□□ -0.6
PCDH15-230ENST00000617051 YTHDC1Q96MU7 727 aaKnown RBP11.25□□□□□ -0.61
PCDH15-230ENST00000617051 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.61
PCDH15-230ENST00000617051 ESF1Q9H501 851 aaKnown RBP11.19□□□□□ -0.62
PCDH15-230ENST00000617051 CLSPNQ9HAW4 1339 aa11.18□□□□□ -0.62
PCDH15-230ENST00000617051 BCANQ96GW7 911 aa11.17□□□□□ -0.62
PCDH15-230ENST00000617051 NEFMP07197 916 aa11.17□□□□□ -0.62
PCDH15-230ENST00000617051 FBLN2P98095 1184 aa11.15□□□□□ -0.62
PCDH15-230ENST00000617051 ZNF316A6NFI3 1004 aaPredicted RBP11.14□□□□□ -0.63
PCDH15-230ENST00000617051 TRIM52Q96A61 297 aa11.14□□□□□ -0.63
PCDH15-230ENST00000617051 MYT1Q01538 1121 aa11.1□□□□□ -0.63
PCDH15-230ENST00000617051 CNGB1Q14028 1251 aaPredicted RBP11.08□□□□□ -0.64
PCDH15-230ENST00000617051 FAM50AQ14320 339 aaKnown RBP11.08□□□□□ -0.64
PCDH15-230ENST00000617051 TRIM26Q12899 539 aaPredicted RBP11.08□□□□□ -0.64
PCDH15-230ENST00000617051 NPM1P06748 294 aaKnown RBP eCLIP11.07□□□□□ -0.64
PCDH15-230ENST00000617051 SLC24A1O60721 1099 aa11.06□□□□□ -0.64
PCDH15-230ENST00000617051 PPARGC1BQ86YN6 1023 aaKnown RBP11.05□□□□□ -0.64
PCDH15-230ENST00000617051 PABPN1Q86U42 306 aaKnown RBP eCLIP11.02□□□□□ -0.65
PCDH15-230ENST00000617051 CDK11AQ9UQ88 783 aaPredicted RBP11.01□□□□□ -0.65
PCDH15-230ENST00000617051 RTL5Q5HYW3 569 aaPredicted RBP11□□□□□ -0.65
PCDH15-230ENST00000617051 ABCC9O60706 1549 aa10.98□□□□□ -0.65
PCDH15-230ENST00000617051 STAG3Q9UJ98 1225 aa10.98□□□□□ -0.65
PCDH15-230ENST00000617051 CANXP27824 592 aaKnown RBP10.97□□□□□ -0.65
PCDH15-230ENST00000617051 ZNF326Q5BKZ1 582 aaKnown RBP10.96□□□□□ -0.65
PCDH15-230ENST00000617051 ZNF777Q9ULD5 760 aaPredicted RBP10.85□□□□□ -0.67
PCDH15-230ENST00000617051 NEUROD1Q13562 356 aa10.84□□□□□ -0.67
PCDH15-230ENST00000617051 ANP32CO43423 234 aa10.84□□□□□ -0.67
PCDH15-230ENST00000617051 NPM2Q86SE8 214 aaKnown RBP10.82□□□□□ -0.68
PCDH15-230ENST00000617051 CHGAP10645 457 aaKnown RBP10.82□□□□□ -0.68
PCDH15-230ENST00000617051 PLPPR3Q6T4P5 718 aa10.81□□□□□ -0.68
PCDH15-230ENST00000617051 HRCP23327 699 aa10.8□□□□□ -0.68
PCDH15-230ENST00000617051 ARID3CA6NKF2 412 aa10.75□□□□□ -0.69
PCDH15-230ENST00000617051 BCL11AQ9H165 835 aa10.74□□□□□ -0.69
PCDH15-230ENST00000617051 SCAF1Q9H7N4 1312 aaKnown RBP10.73□□□□□ -0.69
PCDH15-230ENST00000617051 CDK11BP21127 795 aaKnown RBP10.7□□□□□ -0.7
PCDH15-230ENST00000617051 P3H3Q8IVL6 736 aa10.69□□□□□ -0.7
PCDH15-230ENST00000617051 A0A0G2JS52 829 aa10.69□□□□□ -0.7
PCDH15-230ENST00000617051 LOC105371045A0A1W2PR82 267 aa10.69□□□□□ -0.7
PCDH15-230ENST00000617051 PPP1R15AO75807 674 aaPredicted RBP10.67□□□□□ -0.7
PCDH15-230ENST00000617051 C14orf37Q86TY3 774 aa10.67□□□□□ -0.7
PCDH15-230ENST00000617051 HAP1P54257 671 aaPredicted RBP10.67□□□□□ -0.7
PCDH15-230ENST00000617051 ANP32BQ92688 251 aaKnown RBP10.67□□□□□ -0.7
PCDH15-230ENST00000617051 DIEXFQ68CQ4 756 aaKnown RBP10.66□□□□□ -0.7
PCDH15-230ENST00000617051 TSPY4P0CV99 314 aa10.65□□□□□ -0.7
PCDH15-230ENST00000617051 TSPY10P0CW01 314 aa10.65□□□□□ -0.7
PCDH15-230ENST00000617051 UPF2Q9HAU5 1272 aaKnown RBP10.64□□□□□ -0.71
PCDH15-230ENST00000617051 CHMP7Q8WUX9 453 aaPredicted RBP10.64□□□□□ -0.71
PCDH15-230ENST00000617051 CSRNP3Q8WYN3 585 aa10.63□□□□□ -0.71
PCDH15-230ENST00000617051 HSP90AA1P07900 732 aaKnown RBP10.63□□□□□ -0.71
PCDH15-230ENST00000617051 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.59□□□□□ -0.71
PCDH15-230ENST00000617051 ACIN1Q9UKV3 1341 aaKnown RBP10.59□□□□□ -0.71
PCDH15-230ENST00000617051 ARID4BQ4LE39 1312 aaPredicted RBP10.59□□□□□ -0.71
PCDH15-230ENST00000617051 TONSLQ96HA7 1378 aa10.59□□□□□ -0.71
PCDH15-230ENST00000617051 MYH16Q9H6N6 1097 aa10.58□□□□□ -0.72
PCDH15-230ENST00000617051 ANP32AP39687 249 aaKnown RBP10.58□□□□□ -0.72
PCDH15-230ENST00000617051 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.57□□□□□ -0.72
PCDH15-230ENST00000617051 ZBTB7CA1YPR0 619 aa10.56□□□□□ -0.72
PCDH15-230ENST00000617051 WDR43Q15061 677 aaKnown RBP eCLIP10.55□□□□□ -0.72
PCDH15-230ENST00000617051 PLEKHD1A6NEE1 506 aa10.49□□□□□ -0.73
PCDH15-230ENST00000617051 NPHP1O15259 732 aa10.48□□□□□ -0.73
PCDH15-230ENST00000617051 EIF5BO60841 1220 aaKnown RBP10.47□□□□□ -0.73
PCDH15-230ENST00000617051 MTUS2Q5JR59 1369 aa10.46□□□□□ -0.73
PCDH15-230ENST00000617051 CFAP53Q96M91 514 aa10.46□□□□□ -0.73
PCDH15-230ENST00000617051 HDGFP51858 240 aaKnown RBP10.46□□□□□ -0.74
PCDH15-230ENST00000617051 CDCA8Q53HL2 280 aa10.46□□□□□ -0.74
PCDH15-230ENST00000617051 SCRIBQ14160 1630 aa10.45□□□□□ -0.74
PCDH15-230ENST00000617051 EIF4G2P78344 907 aaKnown RBP eCLIP10.45□□□□□ -0.74
PCDH15-230ENST00000617051 KCNH8Q96L42 1107 aa10.43□□□□□ -0.74
PCDH15-230ENST00000617051 TRHP20396 242 aaPredicted RBP10.43□□□□□ -0.74
PCDH15-230ENST00000617051 TMC1Q8TDI8 760 aa10.43□□□□□ -0.74
PCDH15-230ENST00000617051 ARXQ96QS3 562 aa10.42□□□□□ -0.74
PCDH15-230ENST00000617051 RSF1Q96T23 1441 aaPredicted RBP10.41□□□□□ -0.74
PCDH15-230ENST00000617051 CHIC2Q9UKJ5 165 aa10.41□□□□□ -0.74
PCDH15-230ENST00000617051 PLEKHG5O94827 1062 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms