Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLDN6P56747 AC008957.3-201ENST00000624112 2242 ntBASIC6.03□□□□□ -1.44
CLDN6P56747 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CLDN6P56747 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLDN6P56747 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLDN6P56747 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLDN6P56747 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.03□□□□□ -1.44
CLDN6P56747 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.03□□□□□ -1.44
CLDN6P56747 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLDN6P56747 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.03□□□□□ -1.44
CLDN6P56747 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLDN6P56747 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
CLDN6P56747 AC125238.2-201ENST00000430003 1440 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLDN6P56747 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.02□□□□□ -1.45
CLDN6P56747 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CLDN6P56747 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLDN6P56747 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CLDN6P56747 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.02□□□□□ -1.45
CLDN6P56747 HSPE1P27-201ENST00000430808 296 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CLDN6P56747 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.02□□□□□ -1.45
CLDN6P56747 AP006222.1-205ENST00000450734 457 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 YWHAEP1-201ENST00000453697 763 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 RPSAP39-201ENST00000467439 883 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 KHDC1P1-201ENST00000511053 508 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.02□□□□□ -1.45
CLDN6P56747 Y_RNA.710-201ENST00000516975 110 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.02□□□□□ -1.45
CLDN6P56747 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.02□□□□□ -1.45
CLDN6P56747 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.02□□□□□ -1.45
CLDN6P56747 AP003396.4-201ENST00000527574 265 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 AC027667.1-201ENST00000545814 304 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 AC092375.1-201ENST00000550410 637 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 AP005119.1-201ENST00000580956 292 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 AP001823.1-201ENST00000604056 1003 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 AL021707.7-201ENST00000607991 416 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 AC016590.3-201ENST00000611171 753 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 AC245014.3-201ENST00000618589 347 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 AC096708.4-201ENST00000620563 552 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.02□□□□□ -1.45
CLDN6P56747 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CLDN6P56747 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLDN6P56747 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CLDN6P56747 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.02□□□□□ -1.45
CLDN6P56747 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLDN6P56747 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.02□□□□□ -1.45
CLDN6P56747 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLDN6P56747 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLDN6P56747 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLDN6P56747 FO082842.1-201ENST00000423552 1370 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLDN6P56747 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CLDN6P56747 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.02□□□□□ -1.45
CLDN6P56747 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CLDN6P56747 AC015689.2-201ENST00000528172 1738 ntBASIC6.02□□□□□ -1.45
CLDN6P56747 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLDN6P56747 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLDN6P56747 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLDN6P56747 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
CLDN6P56747 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN6P56747 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN6P56747 NEK2P4-201ENST00000425793 1329 ntBASIC6.01□□□□□ -1.45
CLDN6P56747 AL512310.3-201ENST00000547023 1335 ntBASIC6.01□□□□□ -1.45
CLDN6P56747 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
CLDN6P56747 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.01□□□□□ -1.45
CLDN6P56747 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN6P56747 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN6P56747 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.01□□□□□ -1.45
CLDN6P56747 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN6P56747 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.01□□□□□ -1.45
CLDN6P56747 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN6P56747 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN6P56747 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.01□□□□□ -1.45
CLDN6P56747 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.01□□□□□ -1.45
CLDN6P56747 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.01□□□□□ -1.45
CLDN6P56747 UGT2B27P-201ENST00000505092 1620 ntBASIC6.01□□□□□ -1.45
CLDN6P56747 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CLDN6P56747 AL096711.1-201ENST00000404780 554 ntBASIC6.01□□□□□ -1.45
CLDN6P56747 U3.43-201ENST00000410734 213 ntBASIC6.01□□□□□ -1.45
CLDN6P56747 RN7SKP286-201ENST00000410894 299 ntBASIC6.01□□□□□ -1.45
CLDN6P56747 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLDN6P56747 SUMO2P3-201ENST00000438311 288 ntBASIC6.01□□□□□ -1.45
CLDN6P56747 AC064862.4-201ENST00000442180 334 ntBASIC6.01□□□□□ -1.45
CLDN6P56747 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.01□□□□□ -1.45
CLDN6P56747 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.01□□□□□ -1.45
CLDN6P56747 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.01□□□□□ -1.45
CLDN6P56747 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.01□□□□□ -1.45
CLDN6P56747 COX6B1P2-201ENST00000489624 230 ntBASIC6.01□□□□□ -1.45
CLDN6P56747 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN6P56747 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.01□□□□□ -1.45
CLDN6P56747 AC021269.1-201ENST00000526860 705 ntBASIC6.01□□□□□ -1.45
CLDN6P56747 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.01□□□□□ -1.45
CLDN6P56747 RPA2P1-201ENST00000556557 721 ntBASIC6.01□□□□□ -1.45
CLDN6P56747 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN6P56747 AL591167.1-201ENST00000607321 456 ntBASIC6.01□□□□□ -1.45
CLDN6P56747 SDR42E1P1-201ENST00000611327 477 ntBASIC6.01□□□□□ -1.45
CLDN6P56747 PCA3_2.1-201ENST00000612507 409 ntBASIC6.01□□□□□ -1.45
CLDN6P56747 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms