RNA–Protein interactions for RNA: ENST00000620443.1

GRIA3-207, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GRIA3, Length 4,943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-207ENST00000620443 PELP1Q8IZL8 1130 aaKnown RBP10.52□□□□□ -0.73
GRIA3-207ENST00000620443 MYT1Q01538 1121 aa10.35□□□□□ -0.75
GRIA3-207ENST00000620443 ERICH6Q7L0X2 663 aa10.17□□□□□ -0.78
GRIA3-207ENST00000620443 DCAF8L2P0C7V8 631 aa10.06□□□□□ -0.8
GRIA3-207ENST00000620443 CENPBP07199 599 aaPredicted RBP10.01□□□□□ -0.81
GRIA3-207ENST00000620443 CCER1Q8TC90 406 aaPredicted RBP10.01□□□□□ -0.81
GRIA3-207ENST00000620443 SUPT5HO00267 1087 aaKnown RBP9.93□□□□□ -0.82
GRIA3-207ENST00000620443 PCGF6Q9BYE7 350 aa9.83□□□□□ -0.84
GRIA3-207ENST00000620443 EHMT2Q96KQ7 1210 aa9.81□□□□□ -0.84
GRIA3-207ENST00000620443 TTBK1Q5TCY1 1321 aaPredicted RBP9.75□□□□□ -0.85
GRIA3-207ENST00000620443 NEFLP07196 543 aa9.72□□□□□ -0.85
GRIA3-207ENST00000620443 YTHDC1Q96MU7 727 aaKnown RBP9.7□□□□□ -0.86
GRIA3-207ENST00000620443 ZEB1P37275 1124 aaPredicted RBP9.68□□□□□ -0.86
GRIA3-207ENST00000620443 APLP2Q06481 763 aa9.6□□□□□ -0.87
GRIA3-207ENST00000620443 DAXXQ9UER7 740 aaPredicted RBP9.51□□□□□ -0.89
GRIA3-207ENST00000620443 RTL5Q5HYW3 569 aaPredicted RBP9.47□□□□□ -0.89
GRIA3-207ENST00000620443 FAM9AQ8IZU1 332 aaPredicted RBP9.44□□□□□ -0.9
GRIA3-207ENST00000620443 SHROOM4Q9ULL8 1493 aa9.44□□□□□ -0.9
GRIA3-207ENST00000620443 HRCP23327 699 aa9.4□□□□□ -0.91
GRIA3-207ENST00000620443 NISCHQ9Y2I1 1504 aa9.37□□□□□ -0.91
GRIA3-207ENST00000620443 EIF5BO60841 1220 aaKnown RBP9.3□□□□□ -0.92
GRIA3-207ENST00000620443 ZNF316A6NFI3 1004 aaPredicted RBP9.28□□□□□ -0.92
GRIA3-207ENST00000620443 PPARGC1BQ86YN6 1023 aaKnown RBP9.24□□□□□ -0.93
GRIA3-207ENST00000620443 GTF3C3Q9Y5Q9 886 aa9.23□□□□□ -0.93
GRIA3-207ENST00000620443 RANGAP1P46060 587 aaPredicted RBP9.2□□□□□ -0.94
GRIA3-207ENST00000620443 TRIM26Q12899 539 aaPredicted RBP9.19□□□□□ -0.94
GRIA3-207ENST00000620443 GLIPR1L2Q4G1C9 344 aa9.19□□□□□ -0.94
GRIA3-207ENST00000620443 BCANQ96GW7 911 aa9.16□□□□□ -0.94
GRIA3-207ENST00000620443 CLSPNQ9HAW4 1339 aa9.15□□□□□ -0.94
GRIA3-207ENST00000620443 DIEXFQ68CQ4 756 aaKnown RBP9.13□□□□□ -0.95
GRIA3-207ENST00000620443 ATP1B4Q9UN42 357 aaPredicted RBP9.09□□□□□ -0.95
GRIA3-207ENST00000620443 TRIM41Q8WV44 630 aa9.08□□□□□ -0.96
GRIA3-207ENST00000620443 POLR3GLQ9BT43 218 aa9.08□□□□□ -0.96
GRIA3-207ENST00000620443 CDK11AQ9UQ88 783 aaPredicted RBP9.08□□□□□ -0.96
GRIA3-207ENST00000620443 CNGB1Q14028 1251 aaPredicted RBP9.08□□□□□ -0.96
GRIA3-207ENST00000620443 UBTFP17480 764 aaKnown RBP9.05□□□□□ -0.96
GRIA3-207ENST00000620443 ACIN1Q9UKV3 1341 aaKnown RBP9.01□□□□□ -0.97
GRIA3-207ENST00000620443 ANP32AP39687 249 aaKnown RBP8.97□□□□□ -0.97
GRIA3-207ENST00000620443 MYT1LQ9UL68 1186 aa8.95□□□□□ -0.98
GRIA3-207ENST00000620443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.94□□□□□ -0.98
GRIA3-207ENST00000620443 ITGAEP38570 1179 aa8.93□□□□□ -0.98
GRIA3-207ENST00000620443 HNRNPUL2Q1KMD3 747 aaKnown RBP8.93□□□□□ -0.98
GRIA3-207ENST00000620443 NPM2Q86SE8 214 aaKnown RBP8.9□□□□□ -0.98
GRIA3-207ENST00000620443 ANP32BQ92688 251 aaKnown RBP8.88□□□□□ -0.99
GRIA3-207ENST00000620443 NBR1Q14596 966 aa8.88□□□□□ -0.99
GRIA3-207ENST00000620443 LOC105371045A0A1W2PR82 267 aa8.84□□□□□ -0.99
GRIA3-207ENST00000620443 ARXQ96QS3 562 aa8.8□□□□□ -1
GRIA3-207ENST00000620443 BCL11AQ9H165 835 aa8.8□□□□□ -1
GRIA3-207ENST00000620443 ANP32CO43423 234 aa8.79□□□□□ -1
GRIA3-207ENST00000620443 FKBP8Q14318 412 aa8.79□□□□□ -1
GRIA3-207ENST00000620443 ZBTB47Q9UFB7 747 aaPredicted RBP8.79□□□□□ -1
GRIA3-207ENST00000620443 SCAF1Q9H7N4 1312 aaKnown RBP8.78□□□□□ -1
GRIA3-207ENST00000620443 SLC4A1APQ9BWU0 796 aaKnown RBP8.77□□□□□ -1
GRIA3-207ENST00000620443 TNNT2P45379 298 aaPredicted RBP8.77□□□□□ -1.01
GRIA3-207ENST00000620443 ANP32EQ9BTT0 268 aa8.77□□□□□ -1.01
GRIA3-207ENST00000620443 NEUROD1Q13562 356 aa8.74□□□□□ -1.01
GRIA3-207ENST00000620443 RTN4Q9NQC3 1192 aaKnown RBP8.73□□□□□ -1.01
GRIA3-207ENST00000620443 HSP90AA1P07900 732 aaKnown RBP8.72□□□□□ -1.01
GRIA3-207ENST00000620443 CANXP27824 592 aaKnown RBP8.71□□□□□ -1.01
GRIA3-207ENST00000620443 CDK11BP21127 795 aaKnown RBP8.7□□□□□ -1.02
GRIA3-207ENST00000620443 CHIC1Q5VXU3 224 aa8.68□□□□□ -1.02
GRIA3-207ENST00000620443 ERICH6BQ5W0A0 696 aa8.66□□□□□ -1.02
GRIA3-207ENST00000620443 UPF2Q9HAU5 1272 aaKnown RBP8.66□□□□□ -1.02
GRIA3-207ENST00000620443 NAP1L5Q96NT1 182 aaPredicted RBP8.65□□□□□ -1.02
GRIA3-207ENST00000620443 TRIM44Q96DX7 344 aaPredicted RBP8.65□□□□□ -1.02
GRIA3-207ENST00000620443 AMER1Q5JTC6 1135 aaPredicted RBP8.65□□□□□ -1.03
GRIA3-207ENST00000620443 NEFMP07197 916 aa8.64□□□□□ -1.03
GRIA3-207ENST00000620443 CCDC136Q96JN2 1154 aa8.61□□□□□ -1.03
GRIA3-207ENST00000620443 HNRNPUQ00839 825 aaKnown RBP eCLIP8.59□□□□□ -1.03
GRIA3-207ENST00000620443 ZNF326Q5BKZ1 582 aaKnown RBP8.57□□□□□ -1.04
GRIA3-207ENST00000620443 TRIM52Q96A61 297 aa8.56□□□□□ -1.04
GRIA3-207ENST00000620443 FAM50AQ14320 339 aaKnown RBP8.56□□□□□ -1.04
GRIA3-207ENST00000620443 DNTTIP2Q5QJE6 756 aaKnown RBP8.54□□□□□ -1.04
GRIA3-207ENST00000620443 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.54□□□□□ -1.04
GRIA3-207ENST00000620443 NCLP19338 710 aaKnown RBP8.53□□□□□ -1.04
GRIA3-207ENST00000620443 IRX6P78412 446 aaPredicted RBP8.53□□□□□ -1.04
GRIA3-207ENST00000620443 SLC24A1O60721 1099 aa8.51□□□□□ -1.05
GRIA3-207ENST00000620443 DEKP35659 375 aaKnown RBP8.51□□□□□ -1.05
GRIA3-207ENST00000620443 PTMAP06454 111 aaKnown RBP8.51□□□□□ -1.05
GRIA3-207ENST00000620443 ARID4BQ4LE39 1312 aaPredicted RBP8.5□□□□□ -1.05
GRIA3-207ENST00000620443 PPM1GO15355 546 aaPredicted RBP8.5□□□□□ -1.05
GRIA3-207ENST00000620443 FAM9BQ8IZU0 186 aa8.5□□□□□ -1.05
GRIA3-207ENST00000620443 DDRGK1Q96HY6 314 aa8.5□□□□□ -1.05
GRIA3-207ENST00000620443 LAS1LQ9Y4W2 734 aaKnown RBP8.48□□□□□ -1.05
GRIA3-207ENST00000620443 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.47□□□□□ -1.05
GRIA3-207ENST00000620443 SALL2Q9Y467 1007 aaPredicted RBP8.47□□□□□ -1.05
GRIA3-207ENST00000620443 BECN1Q14457 450 aa8.47□□□□□ -1.05
GRIA3-207ENST00000620443 DDX10Q13206 875 aaKnown RBP8.46□□□□□ -1.05
GRIA3-207ENST00000620443 GOLGA6L22H0YM25 854 aa8.46□□□□□ -1.06
GRIA3-207ENST00000620443 NOP58Q9Y2X3 529 aaKnown RBP8.45□□□□□ -1.06
GRIA3-207ENST00000620443 MIER1Q8N108 512 aa8.45□□□□□ -1.06
GRIA3-207ENST00000620443 CSRNP3Q8WYN3 585 aa8.43□□□□□ -1.06
GRIA3-207ENST00000620443 TNNT3P45378 269 aaPredicted RBP8.41□□□□□ -1.06
GRIA3-207ENST00000620443 ARID3AQ99856 593 aa8.41□□□□□ -1.06
GRIA3-207ENST00000620443 VSIG10Q8N0Z9 540 aa8.4□□□□□ -1.06
GRIA3-207ENST00000620443 PNNQ9H307 717 aaKnown RBP8.38□□□□□ -1.07
GRIA3-207ENST00000620443 PLCB2Q00722 1185 aa8.37□□□□□ -1.07
GRIA3-207ENST00000620443 MRS2Q9HD23 443 aa8.36□□□□□ -1.07
GRIA3-207ENST00000620443 TMC1Q8TDI8 760 aa8.36□□□□□ -1.07
GRIA3-207ENST00000620443 MSNP26038 577 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms