Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC099842.1-201ENST00000619919 596 ntBASIC7.65□□□□□ -1.18
SOX1O00570 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.65□□□□□ -1.18
SOX1O00570 SNORA17.5-201ENST00000630429 132 ntBASIC7.65□□□□□ -1.18
SOX1O00570 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.65□□□□□ -1.18
SOX1O00570 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SOX1O00570 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
SOX1O00570 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
SOX1O00570 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.19
SOX1O00570 AC090643.1-201ENST00000623600 3100 ntBASIC7.65□□□□□ -1.19
SOX1O00570 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
SOX1O00570 OR51E1-202ENST00000530215 2942 ntBASIC7.65□□□□□ -1.19
SOX1O00570 MAPK10-357ENST00000641831 2858 ntBASIC7.65□□□□□ -1.19
SOX1O00570 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
SOX1O00570 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SOX1O00570 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 MTND5P24-201ENST00000438892 1767 ntBASIC7.64□□□□□ -1.19
SOX1O00570 MS4A6A-203ENST00000426738 1736 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX1O00570 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC7.64□□□□□ -1.19
SOX1O00570 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 AC130360.2-201ENST00000533477 1556 ntBASIC7.64□□□□□ -1.19
SOX1O00570 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
SOX1O00570 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC7.64□□□□□ -1.19
SOX1O00570 AL121936.1-201ENST00000641660 2884 ntBASIC7.64□□□□□ -1.19
SOX1O00570 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SOX1O00570 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SOX1O00570 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 RNU4-51P-201ENST00000364206 140 ntBASIC7.64□□□□□ -1.19
SOX1O00570 RNA5SP77-201ENST00000365394 120 ntBASIC7.64□□□□□ -1.19
SOX1O00570 AC006511.2-201ENST00000388966 660 ntBASIC7.64□□□□□ -1.19
SOX1O00570 TRAV35-201ENST00000390462 330 ntBASIC7.64□□□□□ -1.19
SOX1O00570 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX1O00570 AC136624.1-201ENST00000400791 413 ntBASIC7.64□□□□□ -1.19
SOX1O00570 RNA5SP198-201ENST00000410376 127 ntBASIC7.64□□□□□ -1.19
SOX1O00570 RN7SKP261-201ENST00000410948 278 ntBASIC7.64□□□□□ -1.19
SOX1O00570 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC7.64□□□□□ -1.19
SOX1O00570 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.64□□□□□ -1.19
SOX1O00570 CHCHD3P1-201ENST00000425516 676 ntBASIC7.64□□□□□ -1.19
SOX1O00570 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.64□□□□□ -1.19
SOX1O00570 AC108479.1-201ENST00000431142 427 ntBASIC7.64□□□□□ -1.19
SOX1O00570 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC7.64□□□□□ -1.19
SOX1O00570 PTGES3P1-201ENST00000439531 483 ntBASIC7.64□□□□□ -1.19
SOX1O00570 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC7.64□□□□□ -1.19
SOX1O00570 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.64□□□□□ -1.19
SOX1O00570 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SOX1O00570 RN7SL552P-201ENST00000462094 276 ntBASIC7.64□□□□□ -1.19
SOX1O00570 AC023245.1-201ENST00000468501 517 ntBASIC7.64□□□□□ -1.19
SOX1O00570 RPL7P16-201ENST00000479738 738 ntBASIC7.64□□□□□ -1.19
SOX1O00570 RPL5P14-201ENST00000494197 878 ntBASIC7.64□□□□□ -1.19
SOX1O00570 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX1O00570 RPL5P11-201ENST00000498068 893 ntBASIC7.64□□□□□ -1.19
SOX1O00570 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.64□□□□□ -1.19
SOX1O00570 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC7.64□□□□□ -1.19
SOX1O00570 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.64□□□□□ -1.19
SOX1O00570 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.64□□□□□ -1.19
SOX1O00570 RNU6-759P-201ENST00000516740 103 ntBASIC7.64□□□□□ -1.19
SOX1O00570 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.64□□□□□ -1.19
SOX1O00570 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC7.64□□□□□ -1.19
SOX1O00570 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX1O00570 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC7.64□□□□□ -1.19
SOX1O00570 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 PDCL2P2-201ENST00000533651 189 ntBASIC7.64□□□□□ -1.19
SOX1O00570 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX1O00570 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SOX1O00570 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX1O00570 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC7.64□□□□□ -1.19
SOX1O00570 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.64□□□□□ -1.19
SOX1O00570 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.64□□□□□ -1.19
SOX1O00570 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.64□□□□□ -1.19
SOX1O00570 AC006362.1-201ENST00000567392 174 ntBASIC7.64□□□□□ -1.19
SOX1O00570 AC090616.2-202ENST00000584248 222 ntBASIC7.64□□□□□ -1.19
SOX1O00570 AL445423.1-201ENST00000609941 536 ntBASIC7.64□□□□□ -1.19
SOX1O00570 AL135999.3-201ENST00000610501 812 ntBASIC7.64□□□□□ -1.19
SOX1O00570 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
SOX1O00570 MIR6719-201ENST00000622428 87 ntBASIC7.64□□□□□ -1.19
SOX1O00570 AL356121.2-201ENST00000624715 780 ntBASIC7.64□□□□□ -1.19
SOX1O00570 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX1O00570 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX1O00570 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC7.64□□□□□ -1.19
SOX1O00570 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC7.64□□□□□ -1.19
SOX1O00570 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
SOX1O00570 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX1O00570 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX1O00570 MAPK10-319ENST00000641459 2542 ntBASIC7.63□□□□□ -1.19
SOX1O00570 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SOX1O00570 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SOX1O00570 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms