Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 CU633967.1-204ENST00000624627 1604 ntTSL 2 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 MTCO1P23-201ENST00000415223 1526 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 EEF1GP6-201ENST00000402309 905 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 FGF7P8-201ENST00000402994 292 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 PIGPP2-201ENST00000411569 458 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC008063.1-201ENST00000418335 640 ntTSL 3 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC009480.2-201ENST00000422916 432 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC108448.2-201ENST00000431546 730 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 OSBPL10-AS1-204ENST00000436598 513 ntTSL 3 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 TRIM60P16-201ENST00000444048 694 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 ARL2BPP7-201ENST00000446421 490 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 TPT1P14-201ENST00000448018 505 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 TUBB4BP2-201ENST00000454125 798 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 RPS4XP12-201ENST00000461747 709 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 RPL12P5-201ENST00000475149 392 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 RPS7P6-201ENST00000485777 579 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 RPL9P6-201ENST00000492764 598 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC023424.2-201ENST00000493479 777 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 LEF1-AS1-205ENST00000508286 444 ntTSL 2 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 BTG4P1-201ENST00000510421 183 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 IGKV3D-31-201ENST00000519131 281 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 OR5BC1P-201ENST00000529327 739 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 OR4C2P-201ENST00000530855 1064 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC233290.2-201ENST00000552852 390 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC012065.4-201ENST00000602445 679 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AL158211.4-201ENST00000606988 584 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC000068.3-201ENST00000607934 427 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 MTND5P17-201ENST00000418405 1603 ntBASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
PCDHGA11Q9Y5H2 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 CR383658.2-201ENST00000547576 1525 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms