RNA–Protein interactions for RNA: ENST00000507958.5

CDH18-207, Transcript of cadherin 18, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDH18, Length 3,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-207ENST00000507958 NISCHQ9Y2I1 1504 aa15.51■□□□□ 0.07
CDH18-207ENST00000507958 ZCCHC6Q5VYS8 1495 aaKnown RBP13.28□□□□□ -0.28
CDH18-207ENST00000507958 CCDC180Q9P1Z9 1646 aa13.27□□□□□ -0.29
CDH18-207ENST00000507958 HRCP23327 699 aa13.13□□□□□ -0.31
CDH18-207ENST00000507958 MYO15BQ96JP2 1530 aa13.12□□□□□ -0.31
CDH18-207ENST00000507958 DCAF1Q9Y4B6 1507 aa12.99□□□□□ -0.33
CDH18-207ENST00000507958 SHROOM4Q9ULL8 1493 aa12.95□□□□□ -0.34
CDH18-207ENST00000507958 CHIC1Q5VXU3 224 aa12.89□□□□□ -0.35
CDH18-207ENST00000507958 SUPT5HO00267 1087 aaKnown RBP12.78□□□□□ -0.36
CDH18-207ENST00000507958 ABCC9O60706 1549 aa12.65□□□□□ -0.38
CDH18-207ENST00000507958 PCGF6Q9BYE7 350 aa12.63□□□□□ -0.39
CDH18-207ENST00000507958 PPARGC1BQ86YN6 1023 aaKnown RBP12.58□□□□□ -0.4
CDH18-207ENST00000507958 PELP1Q8IZL8 1130 aaKnown RBP12.54□□□□□ -0.4
CDH18-207ENST00000507958 TRIM26Q12899 539 aaPredicted RBP12.5□□□□□ -0.41
CDH18-207ENST00000507958 ZEB1P37275 1124 aaPredicted RBP12.42□□□□□ -0.42
CDH18-207ENST00000507958 RB1CC1Q8TDY2 1594 aa12.38□□□□□ -0.43
CDH18-207ENST00000507958 LOC105371045A0A1W2PR82 267 aa12.34□□□□□ -0.43
CDH18-207ENST00000507958 RSF1Q96T23 1441 aaPredicted RBP12.32□□□□□ -0.44
CDH18-207ENST00000507958 EIF4G1Q04637 1599 aaKnown RBP12.29□□□□□ -0.44
CDH18-207ENST00000507958 SCAF1Q9H7N4 1312 aaKnown RBP12.28□□□□□ -0.44
CDH18-207ENST00000507958 SCRIBQ14160 1630 aa12.14□□□□□ -0.47
CDH18-207ENST00000507958 BAZ1AQ9NRL2 1556 aaPredicted RBP12.1□□□□□ -0.47
CDH18-207ENST00000507958 WRNQ14191 1432 aaPredicted RBP eCLIP12.09□□□□□ -0.47
CDH18-207ENST00000507958 MYT1Q01538 1121 aa12.06□□□□□ -0.48
CDH18-207ENST00000507958 ACIN1Q9UKV3 1341 aaKnown RBP12.03□□□□□ -0.48
CDH18-207ENST00000507958 NACADO15069 1562 aa12.02□□□□□ -0.49
CDH18-207ENST00000507958 MROH2BQ7Z745 1585 aa12.01□□□□□ -0.49
CDH18-207ENST00000507958 TRIM41Q8WV44 630 aa12□□□□□ -0.49
CDH18-207ENST00000507958 WIZO95785 1651 aa12□□□□□ -0.49
CDH18-207ENST00000507958 DCAF8L2P0C7V8 631 aa11.96□□□□□ -0.5
CDH18-207ENST00000507958 CECR2Q9BXF3 1484 aa11.93□□□□□ -0.5
CDH18-207ENST00000507958 NEUROD1Q13562 356 aa11.93□□□□□ -0.5
CDH18-207ENST00000507958 TOP2AP11388 1531 aaKnown RBP11.89□□□□□ -0.51
CDH18-207ENST00000507958 SMARCA2P51531 1590 aa11.83□□□□□ -0.52
CDH18-207ENST00000507958 EEA1Q15075 1411 aa11.82□□□□□ -0.52
CDH18-207ENST00000507958 TNIKQ9UKE5 1360 aa11.81□□□□□ -0.52
CDH18-207ENST00000507958 CEP162Q5TB80 1403 aa11.8□□□□□ -0.52
CDH18-207ENST00000507958 CENPBP07199 599 aaPredicted RBP11.8□□□□□ -0.52
CDH18-207ENST00000507958 DIEXFQ68CQ4 756 aaKnown RBP11.8□□□□□ -0.52
CDH18-207ENST00000507958 SMARCA4P51532 1647 aa11.79□□□□□ -0.52
CDH18-207ENST00000507958 GTF3C3Q9Y5Q9 886 aa11.78□□□□□ -0.52
CDH18-207ENST00000507958 KIF21BO75037 1637 aa11.77□□□□□ -0.52
CDH18-207ENST00000507958 CCDC88BA6NC98 1476 aa11.77□□□□□ -0.53
CDH18-207ENST00000507958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.75□□□□□ -0.53
CDH18-207ENST00000507958 ABCC8Q09428 1581 aa11.75□□□□□ -0.53
CDH18-207ENST00000507958 UNC13AQ9UPW8 1703 aa11.72□□□□□ -0.53
CDH18-207ENST00000507958 CCER1Q8TC90 406 aaPredicted RBP11.72□□□□□ -0.53
CDH18-207ENST00000507958 PEG3Q9GZU2 1588 aa11.72□□□□□ -0.53
CDH18-207ENST00000507958 FAM9AQ8IZU1 332 aaPredicted RBP11.7□□□□□ -0.54
CDH18-207ENST00000507958 GOLGA3Q08378 1498 aa11.68□□□□□ -0.54
CDH18-207ENST00000507958 ZNF316A6NFI3 1004 aaPredicted RBP11.68□□□□□ -0.54
CDH18-207ENST00000507958 SOGA1O94964 1423 aa11.65□□□□□ -0.54
CDH18-207ENST00000507958 BAZ1BQ9UIG0 1483 aaKnown RBP11.65□□□□□ -0.55
CDH18-207ENST00000507958 CLSPNQ9HAW4 1339 aa11.63□□□□□ -0.55
CDH18-207ENST00000507958 RUSC2Q8N2Y8 1516 aa11.59□□□□□ -0.55
CDH18-207ENST00000507958 CEP164Q9UPV0 1460 aa11.59□□□□□ -0.55
CDH18-207ENST00000507958 SYNJ1O43426 1573 aa11.57□□□□□ -0.56
CDH18-207ENST00000507958 CUX2O14529 1486 aa11.57□□□□□ -0.56
CDH18-207ENST00000507958 VPS8Q8N3P4 1428 aa11.56□□□□□ -0.56
CDH18-207ENST00000507958 BIVM-ERCC5R4GMW8 1640 aa11.52□□□□□ -0.57
CDH18-207ENST00000507958 CLIP1P30622 1438 aa11.51□□□□□ -0.57
CDH18-207ENST00000507958 MIER1Q8N108 512 aa11.51□□□□□ -0.57
CDH18-207ENST00000507958 CSRNP3Q8WYN3 585 aa11.5□□□□□ -0.57
CDH18-207ENST00000507958 ERICH3Q5RHP9 1530 aa11.5□□□□□ -0.57
CDH18-207ENST00000507958 TOP2BQ02880 1626 aa11.47□□□□□ -0.57
CDH18-207ENST00000507958 BICRAQ9NZM4 1560 aa11.46□□□□□ -0.58
CDH18-207ENST00000507958 RRBP1Q9P2E9 1410 aaKnown RBP11.43□□□□□ -0.58
CDH18-207ENST00000507958 DHX57Q6P158 1386 aaKnown RBP11.43□□□□□ -0.58
CDH18-207ENST00000507958 EHMT2Q96KQ7 1210 aa11.42□□□□□ -0.58
CDH18-207ENST00000507958 ARAP1Q96P48 1450 aa11.4□□□□□ -0.58
CDH18-207ENST00000507958 RAPGEF2Q9Y4G8 1499 aa11.4□□□□□ -0.58
CDH18-207ENST00000507958 PRXQ9BXM0 1461 aa11.39□□□□□ -0.59
CDH18-207ENST00000507958 TTBK1Q5TCY1 1321 aaPredicted RBP11.38□□□□□ -0.59
CDH18-207ENST00000507958 SUPT16HQ9Y5B9 1047 aaKnown RBP11.38□□□□□ -0.59
CDH18-207ENST00000507958 MAP3K1Q13233 1512 aa11.35□□□□□ -0.59
CDH18-207ENST00000507958 MAPKBP1O60336 1514 aa11.34□□□□□ -0.59
CDH18-207ENST00000507958 YTHDC1Q96MU7 727 aaKnown RBP11.3□□□□□ -0.6
CDH18-207ENST00000507958 TSHZ2Q9NRE2 1034 aa11.3□□□□□ -0.6
CDH18-207ENST00000507958 PRDM2Q13029 1718 aa11.3□□□□□ -0.6
CDH18-207ENST00000507958 ATAD2BQ9ULI0 1458 aa11.29□□□□□ -0.6
CDH18-207ENST00000507958 UBTFP17480 764 aaKnown RBP11.27□□□□□ -0.6
CDH18-207ENST00000507958 ANP32EQ9BTT0 268 aa11.27□□□□□ -0.61
CDH18-207ENST00000507958 CFAP43Q8NDM7 1665 aa11.27□□□□□ -0.61
CDH18-207ENST00000507958 TIAM1Q13009 1591 aa11.22□□□□□ -0.61
CDH18-207ENST00000507958 HNRNPUL2Q1KMD3 747 aaKnown RBP11.22□□□□□ -0.61
CDH18-207ENST00000507958 HMGXB3Q12766 1538 aa11.2□□□□□ -0.62
CDH18-207ENST00000507958 ARHGAP35Q9NRY4 1499 aa11.2□□□□□ -0.62
CDH18-207ENST00000507958 CUX1P39880 1505 aa11.2□□□□□ -0.62
CDH18-207ENST00000507958 CCNB3Q8WWL7 1395 aa11.18□□□□□ -0.62
CDH18-207ENST00000507958 WDR97A6NE52 1622 aa11.16□□□□□ -0.62
CDH18-207ENST00000507958 KANK4Q5T7N3 995 aaPredicted RBP11.12□□□□□ -0.63
CDH18-207ENST00000507958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.12□□□□□ -0.63
CDH18-207ENST00000507958 RAB3GAP2Q9H2M9 1393 aa11.1□□□□□ -0.63
CDH18-207ENST00000507958 BCL11AQ9H165 835 aa11.1□□□□□ -0.63
CDH18-207ENST00000507958 TIMELESSQ9UNS1 1208 aa11.1□□□□□ -0.63
CDH18-207ENST00000507958 LRRC9Q6ZRR7 1453 aa11.1□□□□□ -0.63
CDH18-207ENST00000507958 KDM5BQ9UGL1 1544 aa11.09□□□□□ -0.63
CDH18-207ENST00000507958 PPP1R15AO75807 674 aaPredicted RBP11.09□□□□□ -0.63
CDH18-207ENST00000507958 KIF27Q86VH2 1401 aa11.08□□□□□ -0.64
CDH18-207ENST00000507958 APLP2Q06481 763 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms