Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC2.4□□□□□ -2.02
MACF1Q9UPN3 RTL10-203ENST00000407472 6523 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
MACF1Q9UPN3 PRKG1-203ENST00000373980 6928 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
MACF1Q9UPN3 ZNF623-202ENST00000501748 6759 ntAPPRIS P3 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 RNU1-43P-201ENST00000365052 165 ntBASIC2.4□□□□□ -2.03
MACF1Q9UPN3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 RPL6P5-201ENST00000445678 828 ntBASIC2.4□□□□□ -2.03
MACF1Q9UPN3 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 LINC01748-205ENST00000635616 2143 ntTSL 5 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 NIN-201ENST00000245441 10293 ntAPPRIS P5 TSL 5 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 AC009237.3-203ENST00000442128 3551 ntBASIC2.4□□□□□ -2.03
MACF1Q9UPN3 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 AL136455.1-201ENST00000441083 1240 ntBASIC2.4□□□□□ -2.03
MACF1Q9UPN3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 AC040162.2-201ENST00000573092 157 ntBASIC2.4□□□□□ -2.03
MACF1Q9UPN3 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC2.4□□□□□ -2.03
MACF1Q9UPN3 OR6C71P-202ENST00000641886 1107 ntBASIC2.4□□□□□ -2.03
MACF1Q9UPN3 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 HLF-210ENST00000575345 3589 ntTSL 2 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 LINC00298-201ENST00000426969 2236 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC2.4□□□□□ -2.03
MACF1Q9UPN3 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 AP000473.2-201ENST00000602659 1537 ntBASIC2.4□□□□□ -2.03
MACF1Q9UPN3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 MAPK10-287ENST00000641217 3037 ntBASIC2.4□□□□□ -2.03
MACF1Q9UPN3 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 PBRM1-201ENST00000296302 5145 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 OR5P1P-201ENST00000299512 925 ntBASIC2.4□□□□□ -2.03
MACF1Q9UPN3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 MTCO1P49-201ENST00000523429 802 ntBASIC2.4□□□□□ -2.03
MACF1Q9UPN3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 MLECP1-201ENST00000615893 709 ntBASIC2.4□□□□□ -2.03
MACF1Q9UPN3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 TOGARAM1-201ENST00000361462 6375 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 AGPAT4-203ENST00000366911 7705 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 PBX1-212ENST00000540236 6175 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC2.4□□□□□ -2.03
MACF1Q9UPN3 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 ARHGEF9-228ENST00000636926 5436 ntTSL 5 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 RNA5SP505-201ENST00000364748 108 ntBASIC2.39□□□□□ -2.03
MACF1Q9UPN3 RNA5SP30-201ENST00000365552 115 ntBASIC2.39□□□□□ -2.03
MACF1Q9UPN3 DNAJA1P4-201ENST00000406473 1166 ntBASIC2.39□□□□□ -2.03
MACF1Q9UPN3 RPS4XP16-201ENST00000427198 791 ntBASIC2.39□□□□□ -2.03
MACF1Q9UPN3 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 RN7SL542P-201ENST00000467147 294 ntBASIC2.39□□□□□ -2.03
MACF1Q9UPN3 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 ZNF587-201ENST00000339656 6882 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms