RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 DCAF8L2P0C7V8 631 aa19.33■□□□□ 0.68
NIN-201ENST00000245441 NISCHQ9Y2I1 1504 aa18.8■□□□□ 0.6
NIN-201ENST00000245441 SUPT5HO00267 1087 aaKnown RBP18.58■□□□□ 0.57
NIN-201ENST00000245441 PELP1Q8IZL8 1130 aaKnown RBP18.31■□□□□ 0.52
NIN-201ENST00000245441 SHROOM4Q9ULL8 1493 aa18.22■□□□□ 0.51
NIN-201ENST00000245441 APLP2Q06481 763 aa17.89■□□□□ 0.45
NIN-201ENST00000245441 EHMT2Q96KQ7 1210 aa17.88■□□□□ 0.45
NIN-201ENST00000245441 PCGF6Q9BYE7 350 aa17.64■□□□□ 0.41
NIN-201ENST00000245441 CENPBP07199 599 aaPredicted RBP17.57■□□□□ 0.4
NIN-201ENST00000245441 ZEB1P37275 1124 aaPredicted RBP17.57■□□□□ 0.4
NIN-201ENST00000245441 FAM9AQ8IZU1 332 aaPredicted RBP17.52■□□□□ 0.4
NIN-201ENST00000245441 CCER1Q8TC90 406 aaPredicted RBP17.44■□□□□ 0.38
NIN-201ENST00000245441 TTBK1Q5TCY1 1321 aaPredicted RBP17.38■□□□□ 0.37
NIN-201ENST00000245441 ERICH6Q7L0X2 663 aa17.38■□□□□ 0.37
NIN-201ENST00000245441 TRIM41Q8WV44 630 aa17.3■□□□□ 0.36
NIN-201ENST00000245441 MYT1Q01538 1121 aa17.28■□□□□ 0.36
NIN-201ENST00000245441 NEFLP07196 543 aa17.16■□□□□ 0.34
NIN-201ENST00000245441 RANGAP1P46060 587 aaPredicted RBP17.11■□□□□ 0.33
NIN-201ENST00000245441 UBTFP17480 764 aaKnown RBP17.1■□□□□ 0.33
NIN-201ENST00000245441 ATP1B4Q9UN42 357 aaPredicted RBP17.02■□□□□ 0.32
NIN-201ENST00000245441 YTHDC1Q96MU7 727 aaKnown RBP16.96■□□□□ 0.31
NIN-201ENST00000245441 TRIM26Q12899 539 aaPredicted RBP16.94■□□□□ 0.3
NIN-201ENST00000245441 HRCP23327 699 aa16.79■□□□□ 0.28
NIN-201ENST00000245441 PPARGC1BQ86YN6 1023 aaKnown RBP16.7■□□□□ 0.26
NIN-201ENST00000245441 DAXXQ9UER7 740 aaPredicted RBP16.69■□□□□ 0.26
NIN-201ENST00000245441 ITGAEP38570 1179 aa16.5■□□□□ 0.23
NIN-201ENST00000245441 CHIC1Q5VXU3 224 aa16.5■□□□□ 0.23
NIN-201ENST00000245441 LOC105371045A0A1W2PR82 267 aa16.47■□□□□ 0.23
NIN-201ENST00000245441 HNRNPUL2Q1KMD3 747 aaKnown RBP16.43■□□□□ 0.22
NIN-201ENST00000245441 POLR3GLQ9BT43 218 aa16.43■□□□□ 0.22
NIN-201ENST00000245441 DIEXFQ68CQ4 756 aaKnown RBP16.41■□□□□ 0.22
NIN-201ENST00000245441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.39■□□□□ 0.21
NIN-201ENST00000245441 RTL5Q5HYW3 569 aaPredicted RBP16.34■□□□□ 0.21
NIN-201ENST00000245441 MYT1LQ9UL68 1186 aa16.32■□□□□ 0.2
NIN-201ENST00000245441 ZNF316A6NFI3 1004 aaPredicted RBP16.29■□□□□ 0.2
NIN-201ENST00000245441 CLSPNQ9HAW4 1339 aa16.21■□□□□ 0.19
NIN-201ENST00000245441 CNGB1Q14028 1251 aaPredicted RBP16.2■□□□□ 0.18
NIN-201ENST00000245441 FAM50AQ14320 339 aaKnown RBP16.14■□□□□ 0.17
NIN-201ENST00000245441 SLC4A1APQ9BWU0 796 aaKnown RBP16.13■□□□□ 0.17
NIN-201ENST00000245441 GTF3C3Q9Y5Q9 886 aa16.06■□□□□ 0.16
NIN-201ENST00000245441 ANP32CO43423 234 aa16.06■□□□□ 0.16
NIN-201ENST00000245441 CDK11AQ9UQ88 783 aaPredicted RBP16.02■□□□□ 0.16
NIN-201ENST00000245441 TRIM52Q96A61 297 aa16.01■□□□□ 0.15
NIN-201ENST00000245441 NEUROD1Q13562 356 aa16■□□□□ 0.15
NIN-201ENST00000245441 BCANQ96GW7 911 aa15.93■□□□□ 0.14
NIN-201ENST00000245441 ABCC9O60706 1549 aa15.89■□□□□ 0.13
NIN-201ENST00000245441 ZBTB47Q9UFB7 747 aaPredicted RBP15.89■□□□□ 0.13
NIN-201ENST00000245441 ZNF326Q5BKZ1 582 aaKnown RBP15.85■□□□□ 0.13
NIN-201ENST00000245441 ACIN1Q9UKV3 1341 aaKnown RBP15.85■□□□□ 0.13
NIN-201ENST00000245441 ANP32AP39687 249 aaKnown RBP15.82■□□□□ 0.12
NIN-201ENST00000245441 CANXP27824 592 aaKnown RBP15.81■□□□□ 0.12
NIN-201ENST00000245441 DCAF1Q9Y4B6 1507 aa15.79■□□□□ 0.12
NIN-201ENST00000245441 CCDC180Q9P1Z9 1646 aa15.74■□□□□ 0.11
NIN-201ENST00000245441 PABPN1Q86U42 306 aaKnown RBP eCLIP15.74■□□□□ 0.11
NIN-201ENST00000245441 SCRIBQ14160 1630 aa15.73■□□□□ 0.11
NIN-201ENST00000245441 NEFMP07197 916 aa15.73■□□□□ 0.11
NIN-201ENST00000245441 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
NIN-201ENST00000245441 TONSLQ96HA7 1378 aa15.64■□□□□ 0.09
NIN-201ENST00000245441 ANP32BQ92688 251 aaKnown RBP15.6■□□□□ 0.09
NIN-201ENST00000245441 FBLN2P98095 1184 aa15.6■□□□□ 0.09
NIN-201ENST00000245441 ZCCHC6Q5VYS8 1495 aaKnown RBP15.57■□□□□ 0.08
NIN-201ENST00000245441 SLC24A1O60721 1099 aa15.57■□□□□ 0.08
NIN-201ENST00000245441 UPF2Q9HAU5 1272 aaKnown RBP15.56■□□□□ 0.08
NIN-201ENST00000245441 FKBP8Q14318 412 aa15.55■□□□□ 0.08
NIN-201ENST00000245441 NPM2Q86SE8 214 aaKnown RBP15.55■□□□□ 0.08
NIN-201ENST00000245441 BCL11AQ9H165 835 aa15.54■□□□□ 0.08
NIN-201ENST00000245441 HSP90AA1P07900 732 aaKnown RBP15.54■□□□□ 0.08
NIN-201ENST00000245441 P3H3Q8IVL6 736 aa15.53■□□□□ 0.08
NIN-201ENST00000245441 HNRNPUQ00839 825 aaKnown RBP eCLIP15.52■□□□□ 0.08
NIN-201ENST00000245441 ZNF777Q9ULD5 760 aaPredicted RBP15.47■□□□□ 0.07
NIN-201ENST00000245441 ARID3CA6NKF2 412 aa15.45■□□□□ 0.06
NIN-201ENST00000245441 EIF5BO60841 1220 aaKnown RBP15.43■□□□□ 0.06
NIN-201ENST00000245441 DDX10Q13206 875 aaKnown RBP15.43■□□□□ 0.06
NIN-201ENST00000245441 GLIPR1L2Q4G1C9 344 aa15.43■□□□□ 0.06
NIN-201ENST00000245441 CCDC136Q96JN2 1154 aa15.42■□□□□ 0.06
NIN-201ENST00000245441 FAM9BQ8IZU0 186 aa15.41■□□□□ 0.06
NIN-201ENST00000245441 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.4■□□□□ 0.06
NIN-201ENST00000245441 TMC1Q8TDI8 760 aa15.39■□□□□ 0.05
NIN-201ENST00000245441 CLIP1P30622 1438 aa15.33■□□□□ 0.04
NIN-201ENST00000245441 ESF1Q9H501 851 aaKnown RBP15.31■□□□□ 0.04
NIN-201ENST00000245441 NBR1Q14596 966 aa15.31■□□□□ 0.04
NIN-201ENST00000245441 MRS2Q9HD23 443 aa15.3■□□□□ 0.04
NIN-201ENST00000245441 MTUS2Q5JR59 1369 aa15.3■□□□□ 0.04
NIN-201ENST00000245441 WDR43Q15061 677 aaKnown RBP eCLIP15.3■□□□□ 0.04
NIN-201ENST00000245441 EEA1Q15075 1411 aa15.28■□□□□ 0.04
NIN-201ENST00000245441 STAG3Q9UJ98 1225 aa15.27■□□□□ 0.03
NIN-201ENST00000245441 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.03
NIN-201ENST00000245441 SALL2Q9Y467 1007 aaPredicted RBP15.25■□□□□ 0.03
NIN-201ENST00000245441 GOLGA3Q08378 1498 aa15.24■□□□□ 0.03
NIN-201ENST00000245441 MIER1Q8N108 512 aa15.24■□□□□ 0.03
NIN-201ENST00000245441 CHGAP10645 457 aaKnown RBP15.23■□□□□ 0.03
NIN-201ENST00000245441 RB1CC1Q8TDY2 1594 aa15.23■□□□□ 0.03
NIN-201ENST00000245441 MYH16Q9H6N6 1097 aa15.21■□□□□ 0.03
NIN-201ENST00000245441 CHIC2Q9UKJ5 165 aa15.21■□□□□ 0.03
NIN-201ENST00000245441 EIF4G2P78344 907 aaKnown RBP eCLIP15.21■□□□□ 0.02
NIN-201ENST00000245441 TSPY4P0CV99 314 aa15.19■□□□□ 0.02
NIN-201ENST00000245441 TSPY10P0CW01 314 aa15.19■□□□□ 0.02
NIN-201ENST00000245441 CEP162Q5TB80 1403 aa15.19■□□□□ 0.02
NIN-201ENST00000245441 BECN1Q14457 450 aa15.19■□□□□ 0.02
NIN-201ENST00000245441 DDRGK1Q96HY6 314 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms