Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC006270.3-201ENST00000605967 1036 ntBASIC7.34□□□□□ -1.23
RSPO4Q2I0M5 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.34□□□□□ -1.23
RSPO4Q2I0M5 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.34□□□□□ -1.23
RSPO4Q2I0M5 AC010332.1-201ENST00000620439 97 ntBASIC7.34□□□□□ -1.23
RSPO4Q2I0M5 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
RSPO4Q2I0M5 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RSPO4Q2I0M5 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RSPO4Q2I0M5 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
RSPO4Q2I0M5 MAP3K13-209ENST00000443863 3025 ntTSL 2 BASIC7.34□□□□□ -1.23
RSPO4Q2I0M5 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RSPO4Q2I0M5 AC073349.2-201ENST00000427545 1603 ntBASIC7.34□□□□□ -1.24
RSPO4Q2I0M5 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC7.34□□□□□ -1.24
RSPO4Q2I0M5 PUS3-201ENST00000227474 1843 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
RSPO4Q2I0M5 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 UGT2B28-202ENST00000511240 1525 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AC066616.2-201ENST00000559334 1481 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 RNA5SP114-201ENST00000363780 113 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 RNA5SP232-201ENST00000364144 119 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 RNU4-51P-201ENST00000364206 140 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 SNRNP40-202ENST00000373720 1087 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 SNORA70I-201ENST00000384544 135 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 FAUP2-201ENST00000394301 401 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 TCEA1P4-201ENST00000415066 844 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AC098592.1-201ENST00000419352 333 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 ARL2BPP3-201ENST00000421226 480 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AL139413.1-201ENST00000421309 217 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 MTCO1P43-201ENST00000431831 488 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 RPL3P11-201ENST00000434028 1146 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AL731892.1-201ENST00000437364 1192 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 NFU1P2-201ENST00000448700 469 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 CYCSP20-201ENST00000473154 315 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AC090543.1-201ENST00000492168 485 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AC005178.1-201ENST00000508392 440 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 RNU6-506P-201ENST00000516553 94 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AC021483.2-201ENST00000567415 758 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 RPS7P1-201ENST00000571702 585 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 WDR45BP1-201ENST00000583470 1029 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AL390877.1-201ENST00000605704 214 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 AL139254.2-202ENST00000641937 1156 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 R3HDM2P1-201ENST00000505381 1960 ntBASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 GC-208ENST00000513476 1567 ntTSL 5 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC7.33□□□□□ -1.24
RSPO4Q2I0M5 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms