Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
PCDH1Q08174 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDH1Q08174 SAMM50P1-201ENST00000455403 1399 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 AC087045.3-201ENST00000623046 2468 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH1Q08174 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH1Q08174 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH1Q08174 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH1Q08174 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
PCDH1Q08174 AL451064.2-201ENST00000623514 1654 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDH1Q08174 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH1Q08174 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH1Q08174 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH1Q08174 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.28□□□□□ -1.24
PCDH1Q08174 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH1Q08174 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDH1Q08174 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH1Q08174 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
PCDH1Q08174 AC126773.4-201ENST00000612545 3043 ntBASIC7.27□□□□□ -1.24
PCDH1Q08174 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
PCDH1Q08174 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
PCDH1Q08174 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.27□□□□□ -1.24
PCDH1Q08174 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
PCDH1Q08174 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH1Q08174 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDH1Q08174 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH1Q08174 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH1Q08174 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH1Q08174 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH1Q08174 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH1Q08174 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH1Q08174 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH1Q08174 OR56B2P-201ENST00000317102 954 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH1Q08174 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH1Q08174 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH1Q08174 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH1Q08174 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH1Q08174 AL139327.1-201ENST00000382988 348 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 RNU6-1200P-201ENST00000384162 107 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDH1Q08174 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH1Q08174 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC7.27□□□□□ -1.25
PCDH1Q08174 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDH1Q08174 MYB-206ENST00000420123 1051 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH1Q08174 EIF1P1-201ENST00000421436 341 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 USP9YP35-201ENST00000435696 412 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDH1Q08174 AC096632.2-201ENST00000438139 1239 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDH1Q08174 LIN28AP2-201ENST00000445283 458 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 MRPS21P1-201ENST00000453850 223 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 AC027673.1-201ENST00000456245 405 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 OR13C1P-201ENST00000457612 963 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 RPL7P1-201ENST00000468161 747 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 RPL7P9-201ENST00000468715 747 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH1Q08174 AC104971.1-201ENST00000495117 578 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 AC084871.2-201ENST00000503355 464 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDH1Q08174 AC104090.1-201ENST00000506341 1171 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 DUXAP2-201ENST00000519198 589 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDH1Q08174 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDH1Q08174 AP001646.2-201ENST00000528645 1156 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDH1Q08174 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDH1Q08174 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH1Q08174 RN7SL366P-201ENST00000577957 292 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDH1Q08174 RPL35AP25-201ENST00000584631 330 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH1Q08174 U73023.1-201ENST00000603134 700 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 MTCYBP22-201ENST00000603788 447 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 LARP7P1-201ENST00000605576 316 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDH1Q08174 AL645933.2-201ENST00000606743 1207 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 AC126118.1-201ENST00000607744 628 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
PCDH1Q08174 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH1Q08174 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.27□□□□□ -1.25
PCDH1Q08174 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH1Q08174 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
PCDH1Q08174 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH1Q08174 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH1Q08174 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH1Q08174 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH1Q08174 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
PCDH1Q08174 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH1Q08174 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH1Q08174 DDX10P2-201ENST00000417796 2614 ntBASIC7.27□□□□□ -1.25
PCDH1Q08174 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH1Q08174 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDH1Q08174 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.26□□□□□ -1.25
PCDH1Q08174 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
PCDH1Q08174 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 AP000776.1-201ENST00000530032 1663 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms