Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RPSAP75-201ENST00000605848 301 ntBASIC6.84□□□□□ -1.31
VCPP55072 AL021707.7-201ENST00000607991 416 ntBASIC6.84□□□□□ -1.31
VCPP55072 AP001885.1-201ENST00000621658 558 ntBASIC6.84□□□□□ -1.31
VCPP55072 AC129915.3-201ENST00000634128 948 ntBASIC6.84□□□□□ -1.31
VCPP55072 OR7E91P-202ENST00000642062 1198 ntBASIC6.84□□□□□ -1.31
VCPP55072 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
VCPP55072 DOCK11P1-201ENST00000553480 5932 ntBASIC6.84□□□□□ -1.31
VCPP55072 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.84□□□□□ -1.31
VCPP55072 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VCPP55072 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
VCPP55072 OLMALINC-203ENST00000641087 3779 ntBASIC6.84□□□□□ -1.32
VCPP55072 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.32
VCPP55072 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.84□□□□□ -1.32
VCPP55072 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.32
VCPP55072 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VCPP55072 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.83□□□□□ -1.32
VCPP55072 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VCPP55072 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.83□□□□□ -1.32
VCPP55072 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
VCPP55072 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VCPP55072 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.83□□□□□ -1.32
VCPP55072 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VCPP55072 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
VCPP55072 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VCPP55072 TMSB4XP4-201ENST00000323496 618 ntBASIC6.83□□□□□ -1.32
VCPP55072 OR7E25P-201ENST00000344844 931 ntBASIC6.83□□□□□ -1.32
VCPP55072 AL023284.3-201ENST00000407767 334 ntBASIC6.83□□□□□ -1.32
VCPP55072 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.83□□□□□ -1.32
VCPP55072 MTND6P12-201ENST00000428247 522 ntBASIC6.83□□□□□ -1.32
VCPP55072 AK3P5-201ENST00000432033 519 ntBASIC6.83□□□□□ -1.32
VCPP55072 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.83□□□□□ -1.32
VCPP55072 LSM3P4-201ENST00000502948 309 ntBASIC6.83□□□□□ -1.32
VCPP55072 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.83□□□□□ -1.32
VCPP55072 SNORD46.2-201ENST00000516021 102 ntBASIC6.83□□□□□ -1.32
VCPP55072 AC079905.1-201ENST00000549280 475 ntBASIC6.83□□□□□ -1.32
VCPP55072 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.83□□□□□ -1.32
VCPP55072 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.83□□□□□ -1.32
VCPP55072 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.83□□□□□ -1.32
VCPP55072 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.83□□□□□ -1.32
VCPP55072 BUB1P1-201ENST00000603541 607 ntBASIC6.83□□□□□ -1.32
VCPP55072 AC005277.2-201ENST00000617898 390 ntBASIC6.83□□□□□ -1.32
VCPP55072 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.83□□□□□ -1.32
VCPP55072 AC127024.6-201ENST00000621598 424 ntBASIC6.83□□□□□ -1.32
VCPP55072 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
VCPP55072 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
VCPP55072 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VCPP55072 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VCPP55072 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VCPP55072 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VCPP55072 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.83□□□□□ -1.32
VCPP55072 AL355377.1-201ENST00000621125 1653 ntBASIC6.83□□□□□ -1.32
VCPP55072 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VCPP55072 AC093225.1-201ENST00000506867 1408 ntBASIC6.83□□□□□ -1.32
VCPP55072 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VCPP55072 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.83□□□□□ -1.32
VCPP55072 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.83□□□□□ -1.32
VCPP55072 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VCPP55072 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VCPP55072 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VCPP55072 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
VCPP55072 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.82□□□□□ -1.32
VCPP55072 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.82□□□□□ -1.32
VCPP55072 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VCPP55072 NEK2P2-201ENST00000438441 1338 ntBASIC6.82□□□□□ -1.32
VCPP55072 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VCPP55072 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VCPP55072 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VCPP55072 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VCPP55072 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VCPP55072 RNA5SP242-201ENST00000364171 118 ntBASIC6.82□□□□□ -1.32
VCPP55072 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.82□□□□□ -1.32
VCPP55072 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
VCPP55072 MIR1178-201ENST00000408396 91 ntBASIC6.82□□□□□ -1.32
VCPP55072 RNA5SP178-201ENST00000410380 128 ntBASIC6.82□□□□□ -1.32
VCPP55072 MTND4LP17-201ENST00000414607 293 ntBASIC6.82□□□□□ -1.32
VCPP55072 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.82□□□□□ -1.32
VCPP55072 CYCSP52-201ENST00000422857 310 ntBASIC6.82□□□□□ -1.32
VCPP55072 AC097721.1-201ENST00000427150 1253 ntBASIC6.82□□□□□ -1.32
VCPP55072 CDY8P-201ENST00000428380 1279 ntBASIC6.82□□□□□ -1.32
VCPP55072 AC097463.1-201ENST00000447288 481 ntBASIC6.82□□□□□ -1.32
VCPP55072 CDY20P-201ENST00000447528 1279 ntBASIC6.82□□□□□ -1.32
VCPP55072 AC007998.1-201ENST00000474156 672 ntBASIC6.82□□□□□ -1.32
VCPP55072 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.82□□□□□ -1.32
VCPP55072 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.82□□□□□ -1.32
VCPP55072 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.82□□□□□ -1.32
VCPP55072 LDHAP1-201ENST00000509421 992 ntBASIC6.82□□□□□ -1.32
VCPP55072 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.82□□□□□ -1.32
VCPP55072 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.82□□□□□ -1.32
VCPP55072 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.82□□□□□ -1.32
VCPP55072 AC008429.2-201ENST00000523057 864 ntBASIC6.82□□□□□ -1.32
VCPP55072 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
VCPP55072 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.82□□□□□ -1.32
VCPP55072 AC020978.7-201ENST00000575953 1187 ntBASIC6.82□□□□□ -1.32
VCPP55072 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VCPP55072 AC026898.1-201ENST00000586404 571 ntBASIC6.82□□□□□ -1.32
VCPP55072 AC004948.1-201ENST00000609858 672 ntBASIC6.82□□□□□ -1.32
VCPP55072 MIR7854-201ENST00000620068 65 ntBASIC6.82□□□□□ -1.32
VCPP55072 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
VCPP55072 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.82□□□□□ -1.32
VCPP55072 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 526.9 ms