Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC105420.1-201ENST00000504389 582 ntBASIC10.2□□□□□ -0.78
CFTRP13569 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC10.2□□□□□ -0.78
CFTRP13569 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC10.2□□□□□ -0.78
CFTRP13569 AC015720.2-201ENST00000567709 334 ntBASIC10.2□□□□□ -0.78
CFTRP13569 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC10.2□□□□□ -0.78
CFTRP13569 AC145423.1-201ENST00000605712 336 ntBASIC10.2□□□□□ -0.78
CFTRP13569 AC008115.3-201ENST00000614874 549 ntBASIC10.2□□□□□ -0.78
CFTRP13569 MIR6837-201ENST00000620884 64 ntBASIC10.2□□□□□ -0.78
CFTRP13569 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
CFTRP13569 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CFTRP13569 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CFTRP13569 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
CFTRP13569 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CFTRP13569 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CFTRP13569 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CFTRP13569 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
CFTRP13569 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CFTRP13569 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CFTRP13569 AC110716.2-201ENST00000563865 3945 ntBASIC10.2□□□□□ -0.78
CFTRP13569 ITPK1-AS1-201ENST00000553639 4701 ntBASIC10.2□□□□□ -0.78
CFTRP13569 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CFTRP13569 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CFTRP13569 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CFTRP13569 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC10.19□□□□□ -0.78
CFTRP13569 OR5W1P-201ENST00000423705 938 ntBASIC10.19□□□□□ -0.78
CFTRP13569 AC099677.3-201ENST00000427081 395 ntBASIC10.19□□□□□ -0.78
CFTRP13569 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC10.19□□□□□ -0.78
CFTRP13569 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC10.19□□□□□ -0.78
CFTRP13569 MRE11P1-201ENST00000464884 2127 ntBASIC10.19□□□□□ -0.78
CFTRP13569 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CFTRP13569 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC10.19□□□□□ -0.78
CFTRP13569 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC10.19□□□□□ -0.78
CFTRP13569 AC021146.10-201ENST00000515628 706 ntBASIC10.19□□□□□ -0.78
CFTRP13569 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC10.19□□□□□ -0.78
CFTRP13569 CDC42P3-201ENST00000518493 633 ntBASIC10.19□□□□□ -0.78
CFTRP13569 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC10.19□□□□□ -0.78
CFTRP13569 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CFTRP13569 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
CFTRP13569 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
CFTRP13569 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
CFTRP13569 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
CFTRP13569 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CFTRP13569 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CFTRP13569 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC10.18□□□□□ -0.78
CFTRP13569 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC10.18□□□□□ -0.78
CFTRP13569 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CFTRP13569 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
CFTRP13569 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
CFTRP13569 AC005042.1-201ENST00000393397 800 ntBASIC10.18□□□□□ -0.78
CFTRP13569 AC009804.1-201ENST00000400949 179 ntBASIC10.18□□□□□ -0.78
CFTRP13569 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC10.18□□□□□ -0.78
CFTRP13569 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC10.18□□□□□ -0.78
CFTRP13569 PSMD10P3-201ENST00000437000 448 ntBASIC10.18□□□□□ -0.78
CFTRP13569 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC10.18□□□□□ -0.78
CFTRP13569 OR7A15P-201ENST00000449848 1009 ntBASIC10.18□□□□□ -0.78
CFTRP13569 RPS26P41-201ENST00000450370 284 ntBASIC10.18□□□□□ -0.78
CFTRP13569 OR2AO1P-201ENST00000476497 403 ntBASIC10.18□□□□□ -0.78
CFTRP13569 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC10.18□□□□□ -0.78
CFTRP13569 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CFTRP13569 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
CFTRP13569 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CFTRP13569 MAPK10-344ENST00000641718 3746 ntBASIC10.18□□□□□ -0.78
CFTRP13569 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CFTRP13569 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CFTRP13569 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
CFTRP13569 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CFTRP13569 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CFTRP13569 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
CFTRP13569 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CFTRP13569 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CFTRP13569 AL109941.1-201ENST00000401925 229 ntBASIC10.17□□□□□ -0.78
CFTRP13569 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC10.17□□□□□ -0.78
CFTRP13569 FTH1P10-202ENST00000430907 550 ntBASIC10.17□□□□□ -0.78
CFTRP13569 CYCSP12-201ENST00000437729 300 ntBASIC10.17□□□□□ -0.78
CFTRP13569 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC10.17□□□□□ -0.78
CFTRP13569 AC245047.2-201ENST00000441060 530 ntBASIC10.17□□□□□ -0.78
CFTRP13569 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CFTRP13569 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC10.17□□□□□ -0.78
CFTRP13569 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
CFTRP13569 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC10.17□□□□□ -0.78
CFTRP13569 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC10.17□□□□□ -0.78
CFTRP13569 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC10.17□□□□□ -0.78
CFTRP13569 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CFTRP13569 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CFTRP13569 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC10.17□□□□□ -0.78
CFTRP13569 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CFTRP13569 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
CFTRP13569 AC087516.1-201ENST00000561236 2428 ntBASIC10.17□□□□□ -0.78
CFTRP13569 AC016583.1-201ENST00000624221 2431 ntBASIC10.17□□□□□ -0.78
CFTRP13569 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CFTRP13569 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CFTRP13569 AC114786.1-201ENST00000512892 1415 ntBASIC10.17□□□□□ -0.78
CFTRP13569 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CFTRP13569 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC10.17□□□□□ -0.78
CFTRP13569 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CFTRP13569 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC10.17□□□□□ -0.78
CFTRP13569 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CFTRP13569 SNORA56-201ENST00000383966 129 ntBASIC10.17□□□□□ -0.78
CFTRP13569 MIR550A3-201ENST00000390735 95 ntBASIC10.17□□□□□ -0.78
CFTRP13569 HMGA1P8-201ENST00000414130 321 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms