Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.3□□□□□ -1.24
ERVFC1P60507 AC018797.1-201ENST00000510791 255 ntBASIC7.3□□□□□ -1.24
ERVFC1P60507 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.3□□□□□ -1.24
ERVFC1P60507 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC7.3□□□□□ -1.24
ERVFC1P60507 AC091163.3-201ENST00000518269 1144 ntBASIC7.3□□□□□ -1.24
ERVFC1P60507 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ERVFC1P60507 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.3□□□□□ -1.24
ERVFC1P60507 OR7E10P-201ENST00000526420 991 ntBASIC7.3□□□□□ -1.24
ERVFC1P60507 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.3□□□□□ -1.24
ERVFC1P60507 OR4A1P-201ENST00000532342 920 ntBASIC7.3□□□□□ -1.24
ERVFC1P60507 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.3□□□□□ -1.24
ERVFC1P60507 AC140063.1-201ENST00000541343 259 ntBASIC7.3□□□□□ -1.24
ERVFC1P60507 NXPE2P1-201ENST00000543705 726 ntBASIC7.3□□□□□ -1.24
ERVFC1P60507 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.3□□□□□ -1.24
ERVFC1P60507 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.3□□□□□ -1.24
ERVFC1P60507 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC7.3□□□□□ -1.24
ERVFC1P60507 AC027455.1-201ENST00000574104 594 ntBASIC7.3□□□□□ -1.24
ERVFC1P60507 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.3□□□□□ -1.24
ERVFC1P60507 AC020914.7-201ENST00000594477 545 ntBASIC7.3□□□□□ -1.24
ERVFC1P60507 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC7.3□□□□□ -1.24
ERVFC1P60507 SNX6P1-201ENST00000601728 1224 ntBASIC7.3□□□□□ -1.24
ERVFC1P60507 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC7.3□□□□□ -1.24
ERVFC1P60507 AL590032.1-201ENST00000604920 252 ntBASIC7.3□□□□□ -1.24
ERVFC1P60507 AC107952.2-201ENST00000606048 486 ntBASIC7.3□□□□□ -1.24
ERVFC1P60507 AP002360.4-201ENST00000606980 481 ntBASIC7.3□□□□□ -1.24
ERVFC1P60507 AC007786.3-201ENST00000615154 596 ntBASIC7.3□□□□□ -1.24
ERVFC1P60507 MIR6721-201ENST00000617181 87 ntBASIC7.3□□□□□ -1.24
ERVFC1P60507 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC7.3□□□□□ -1.24
ERVFC1P60507 AC093875.1-201ENST00000623688 504 ntBASIC7.3□□□□□ -1.24
ERVFC1P60507 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.3□□□□□ -1.24
ERVFC1P60507 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC7.3□□□□□ -1.24
ERVFC1P60507 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC7.3□□□□□ -1.24
ERVFC1P60507 CASC19-232ENST00000641480 1244 ntBASIC7.3□□□□□ -1.24
ERVFC1P60507 CASC19-274ENST00000642018 970 ntBASIC7.3□□□□□ -1.24
ERVFC1P60507 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
ERVFC1P60507 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
ERVFC1P60507 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
ERVFC1P60507 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ERVFC1P60507 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ERVFC1P60507 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
ERVFC1P60507 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
ERVFC1P60507 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ERVFC1P60507 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ERVFC1P60507 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ERVFC1P60507 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ERVFC1P60507 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ERVFC1P60507 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.3□□□□□ -1.24
ERVFC1P60507 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ERVFC1P60507 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERVFC1P60507 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERVFC1P60507 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERVFC1P60507 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
ERVFC1P60507 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
ERVFC1P60507 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ERVFC1P60507 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERVFC1P60507 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
ERVFC1P60507 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERVFC1P60507 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.29□□□□□ -1.24
ERVFC1P60507 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.29□□□□□ -1.24
ERVFC1P60507 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.29□□□□□ -1.24
ERVFC1P60507 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
ERVFC1P60507 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.29□□□□□ -1.24
ERVFC1P60507 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERVFC1P60507 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERVFC1P60507 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
ERVFC1P60507 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.29□□□□□ -1.24
ERVFC1P60507 RNA5SP122-201ENST00000384457 108 ntBASIC7.29□□□□□ -1.24
ERVFC1P60507 RN7SKP129-201ENST00000410288 299 ntBASIC7.29□□□□□ -1.24
ERVFC1P60507 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC7.29□□□□□ -1.24
ERVFC1P60507 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.29□□□□□ -1.24
ERVFC1P60507 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC7.29□□□□□ -1.24
ERVFC1P60507 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.29□□□□□ -1.24
ERVFC1P60507 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERVFC1P60507 AL389925.1-201ENST00000432257 728 ntBASIC7.29□□□□□ -1.24
ERVFC1P60507 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.29□□□□□ -1.24
ERVFC1P60507 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.29□□□□□ -1.24
ERVFC1P60507 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC7.29□□□□□ -1.24
ERVFC1P60507 HSFY3P-201ENST00000444242 1191 ntBASIC7.29□□□□□ -1.24
ERVFC1P60507 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.29□□□□□ -1.24
ERVFC1P60507 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.29□□□□□ -1.24
ERVFC1P60507 AC096922.1-201ENST00000461635 651 ntBASIC7.29□□□□□ -1.24
ERVFC1P60507 HMGB1P38-201ENST00000490557 577 ntBASIC7.29□□□□□ -1.24
ERVFC1P60507 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.29□□□□□ -1.24
ERVFC1P60507 AC112484.3-201ENST00000505910 329 ntBASIC7.29□□□□□ -1.24
ERVFC1P60507 HMGN1P16-201ENST00000508308 283 ntBASIC7.29□□□□□ -1.24
ERVFC1P60507 SNX18P23-201ENST00000510867 677 ntBASIC7.29□□□□□ -1.24
ERVFC1P60507 RNU6-276P-201ENST00000516114 96 ntBASIC7.29□□□□□ -1.24
ERVFC1P60507 RNA5SP287-201ENST00000516358 103 ntBASIC7.29□□□□□ -1.24
ERVFC1P60507 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.29□□□□□ -1.24
ERVFC1P60507 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.29□□□□□ -1.24
ERVFC1P60507 TOMM20P1-201ENST00000534518 427 ntBASIC7.29□□□□□ -1.24
ERVFC1P60507 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC7.29□□□□□ -1.24
ERVFC1P60507 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC7.29□□□□□ -1.24
ERVFC1P60507 RPL41P2-201ENST00000544920 409 ntBASIC7.29□□□□□ -1.24
ERVFC1P60507 AL391156.1-201ENST00000554965 554 ntBASIC7.29□□□□□ -1.24
ERVFC1P60507 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC7.29□□□□□ -1.24
ERVFC1P60507 AGGF1P9-201ENST00000561884 913 ntBASIC7.29□□□□□ -1.24
ERVFC1P60507 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERVFC1P60507 NDUFA5P11-201ENST00000567995 343 ntBASIC7.29□□□□□ -1.24
ERVFC1P60507 RN7SL230P-201ENST00000580835 303 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms