RNA–Protein interactions for RNA: ENST00000534756.1

LINC01493-203, Transcript of long intergenic non-protein coding RNA 1493, humanhuman

TSL 3 BASIC

Gene LINC01493, Length 509 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01493-203ENST00000534756 AEBP2Q6ZN18 517 aaPredicted RBP26.59■■□□□ 1.85
LINC01493-203ENST00000534756 CHIC1Q5VXU3 224 aa25.57■■□□□ 1.68
LINC01493-203ENST00000534756 PHF23Q9BUL5 403 aaPredicted RBP22.56■■□□□ 1.2
LINC01493-203ENST00000534756 SENP3Q9H4L4 574 aaPredicted RBP22.45■■□□□ 1.18
LINC01493-203ENST00000534756 FOXD1Q16676 465 aa21■□□□□ 0.95
LINC01493-203ENST00000534756 PLPPR3Q6T4P5 718 aa20.59■□□□□ 0.89
LINC01493-203ENST00000534756 PPP6R1Q9UPN7 881 aa20.05■□□□□ 0.8
LINC01493-203ENST00000534756 ADRA2BP18089 450 aa20.01■□□□□ 0.79
LINC01493-203ENST00000534756 PIAS4Q8N2W9 510 aaPredicted RBP19.7■□□□□ 0.74
LINC01493-203ENST00000534756 MSH5O43196 834 aa19.32■□□□□ 0.68
LINC01493-203ENST00000534756 POTEDQ86YR6 584 aa19.18■□□□□ 0.66
LINC01493-203ENST00000534756 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
LINC01493-203ENST00000534756 PPP4R3CPQ6ZMV5 832 aa18.19■□□□□ 0.5
LINC01493-203ENST00000534756 SCAF1Q9H7N4 1312 aaKnown RBP18.1■□□□□ 0.49
LINC01493-203ENST00000534756 DMRT2Q9Y5R5 561 aa17.91■□□□□ 0.46
LINC01493-203ENST00000534756 CNKSR2Q8WXI2 1034 aa17.67■□□□□ 0.42
LINC01493-203ENST00000534756 NCBP3Q53F19 620 aaKnown RBP17.52■□□□□ 0.4
LINC01493-203ENST00000534756 KCNA4P22459 653 aa17.5■□□□□ 0.39
LINC01493-203ENST00000534756 HOXD11P31277 338 aaPredicted RBP17.41■□□□□ 0.38
LINC01493-203ENST00000534756 NPM3O75607 178 aaKnown RBP17.38■□□□□ 0.37
LINC01493-203ENST00000534756 RNF216Q9NWF9 866 aaPredicted RBP17.38■□□□□ 0.37
LINC01493-203ENST00000534756 DCAF8L1A6NGE4 600 aa17.26■□□□□ 0.35
LINC01493-203ENST00000534756 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
LINC01493-203ENST00000534756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.64■□□□□ 0.25
LINC01493-203ENST00000534756 RNF39Q9H2S5 420 aa16.6■□□□□ 0.25
LINC01493-203ENST00000534756 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
LINC01493-203ENST00000534756 SLC4A2P04920 1241 aa16.51■□□□□ 0.23
LINC01493-203ENST00000534756 CACNB1Q02641 598 aaPredicted RBP16.42■□□□□ 0.22
LINC01493-203ENST00000534756 U3KPZ7 1027 aaPredicted RBP16.35■□□□□ 0.21
LINC01493-203ENST00000534756 C1QBPQ07021 282 aaKnown RBP16.32■□□□□ 0.2
LINC01493-203ENST00000534756 ZBTB22O15209 634 aa16.12■□□□□ 0.17
LINC01493-203ENST00000534756 FOXD4L1Q9NU39 408 aa16.07■□□□□ 0.16
LINC01493-203ENST00000534756 SPINK5Q9NQ38 1064 aaPredicted RBP16.05■□□□□ 0.16
LINC01493-203ENST00000534756 MYCNP04198 464 aaPredicted RBP15.98■□□□□ 0.15
LINC01493-203ENST00000534756 CAPN15O75808 1086 aa15.95■□□□□ 0.14
LINC01493-203ENST00000534756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.88■□□□□ 0.13
LINC01493-203ENST00000534756 HNRNPUL2Q1KMD3 747 aaKnown RBP15.88■□□□□ 0.13
LINC01493-203ENST00000534756 SAMD1Q6SPF0 538 aaPredicted RBP15.86■□□□□ 0.13
LINC01493-203ENST00000534756 TRHP20396 242 aaPredicted RBP15.84■□□□□ 0.13
LINC01493-203ENST00000534756 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
LINC01493-203ENST00000534756 CSRNP3Q8WYN3 585 aa15.76■□□□□ 0.11
LINC01493-203ENST00000534756 APLP2Q06481 763 aa15.75■□□□□ 0.11
LINC01493-203ENST00000534756 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
LINC01493-203ENST00000534756 DSG3P32926 999 aa15.73■□□□□ 0.11
LINC01493-203ENST00000534756 ABCB7O75027 752 aa15.68■□□□□ 0.1
LINC01493-203ENST00000534756 ZNF219Q9P2Y4 722 aaPredicted RBP15.66■□□□□ 0.1
LINC01493-203ENST00000534756 POLA2Q14181 598 aa15.5■□□□□ 0.07
LINC01493-203ENST00000534756 ATXN8OSP0DMR3 200 aa15.47■□□□□ 0.07
LINC01493-203ENST00000534756 ZBTB12Q9Y330 459 aaPredicted RBP15.03■□□□□ -0
LINC01493-203ENST00000534756 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
LINC01493-203ENST00000534756 OSCARQ8IYS5 282 aa14.97□□□□□ -0.01
LINC01493-203ENST00000534756 FBLN2P98095 1184 aa14.94□□□□□ -0.02
LINC01493-203ENST00000534756 RBM42Q9BTD8 480 aaKnown RBP14.87□□□□□ -0.03
LINC01493-203ENST00000534756 POTEHQ6S545 545 aa14.78□□□□□ -0.04
LINC01493-203ENST00000534756 AKT1S1Q96B36 256 aa14.67□□□□□ -0.06
LINC01493-203ENST00000534756 SPDYE2BA6NHP3 402 aa14.66□□□□□ -0.06
LINC01493-203ENST00000534756 SPDYE6P0CI01 402 aa14.66□□□□□ -0.06
LINC01493-203ENST00000534756 SPDYE2Q495Y8 402 aa14.66□□□□□ -0.06
LINC01493-203ENST00000534756 ZNF692Q9BU19 519 aaPredicted RBP14.65□□□□□ -0.06
LINC01493-203ENST00000534756 REM2Q8IYK8 340 aaPredicted RBP14.62□□□□□ -0.07
LINC01493-203ENST00000534756 SSUH2Q9Y2M2 353 aa14.55□□□□□ -0.08
LINC01493-203ENST00000534756 CHRDL2Q6WN34 429 aa14.48□□□□□ -0.09
LINC01493-203ENST00000534756 SPDYE4A6NLX3 237 aa14.47□□□□□ -0.09
LINC01493-203ENST00000534756 PABPN1Q86U42 306 aaKnown RBP eCLIP14.47□□□□□ -0.09
LINC01493-203ENST00000534756 PITPNM1O00562 1244 aa14.46□□□□□ -0.09
LINC01493-203ENST00000534756 CLEC11AQ9Y240 323 aa14.38□□□□□ -0.11
LINC01493-203ENST00000534756 SPDYE1Q8NFV5 336 aaPredicted RBP14.31□□□□□ -0.12
LINC01493-203ENST00000534756 PIP4P2Q8N4L2 257 aa14.26□□□□□ -0.13
LINC01493-203ENST00000534756 FKBP8Q14318 412 aa14.25□□□□□ -0.13
LINC01493-203ENST00000534756 FXR2P51116 673 aaKnown RBP eCLIP14.2□□□□□ -0.14
LINC01493-203ENST00000534756 PRR29P0C7W0 189 aa14.16□□□□□ -0.14
LINC01493-203ENST00000534756 PROM2Q8N271 834 aa14.12□□□□□ -0.15
LINC01493-203ENST00000534756 CHADLQ6NUI6 762 aa14.1□□□□□ -0.15
LINC01493-203ENST00000534756 PRKAR2AP13861 404 aaKnown RBP14.09□□□□□ -0.15
LINC01493-203ENST00000534756 STAG3Q9UJ98 1225 aa14.03□□□□□ -0.16
LINC01493-203ENST00000534756 CREBZFQ9NS37 354 aa13.93□□□□□ -0.18
LINC01493-203ENST00000534756 HAX1O00165 279 aa13.89□□□□□ -0.19
LINC01493-203ENST00000534756 EVX2Q03828 476 aa13.85□□□□□ -0.19
LINC01493-203ENST00000534756 FARP1Q9Y4F1 1045 aaPredicted RBP13.85□□□□□ -0.19
LINC01493-203ENST00000534756 MIER1Q8N108 512 aa13.78□□□□□ -0.2
LINC01493-203ENST00000534756 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
LINC01493-203ENST00000534756 C19orf67A6NJJ6 358 aa13.73□□□□□ -0.21
LINC01493-203ENST00000534756 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
LINC01493-203ENST00000534756 FBXO3Q9UK99 471 aa13.68□□□□□ -0.22
LINC01493-203ENST00000534756 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
LINC01493-203ENST00000534756 SP7Q8TDD2 431 aaPredicted RBP13.64□□□□□ -0.23
LINC01493-203ENST00000534756 PLEKHG5O94827 1062 aa13.6□□□□□ -0.23
LINC01493-203ENST00000534756 NPM1P06748 294 aaKnown RBP eCLIP13.6□□□□□ -0.23
LINC01493-203ENST00000534756 VASPP50552 380 aaPredicted RBP13.59□□□□□ -0.23
LINC01493-203ENST00000534756 ZRANB1Q9UGI0 708 aa13.56□□□□□ -0.24
LINC01493-203ENST00000534756 TSPYL2Q9H2G4 693 aaPredicted RBP13.51□□□□□ -0.25
LINC01493-203ENST00000534756 RASEFQ8IZ41 740 aa13.49□□□□□ -0.25
LINC01493-203ENST00000534756 GABBR2O75899 941 aa13.46□□□□□ -0.25
LINC01493-203ENST00000534756 KLHL34Q8N239 644 aa13.46□□□□□ -0.25
LINC01493-203ENST00000534756 IFNLR1Q8IU57 520 aaPredicted RBP13.45□□□□□ -0.26
LINC01493-203ENST00000534756 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
LINC01493-203ENST00000534756 PAK3O75914 559 aaPredicted RBP13.44□□□□□ -0.26
LINC01493-203ENST00000534756 NUBP1P53384 320 aa13.44□□□□□ -0.26
LINC01493-203ENST00000534756 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
LINC01493-203ENST00000534756 ZNF579Q8NAF0 562 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms