Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.17□□□□□ -1.58
LMO4P61968 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.17□□□□□ -1.58
LMO4P61968 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC5.17□□□□□ -1.58
LMO4P61968 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.17□□□□□ -1.58
LMO4P61968 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.17□□□□□ -1.58
LMO4P61968 AC015849.6-201ENST00000605454 474 ntBASIC5.17□□□□□ -1.58
LMO4P61968 AL158211.2-201ENST00000607282 395 ntBASIC5.17□□□□□ -1.58
LMO4P61968 AC073862.4-201ENST00000622982 854 ntBASIC5.17□□□□□ -1.58
LMO4P61968 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.17□□□□□ -1.58
LMO4P61968 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.17□□□□□ -1.58
LMO4P61968 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LMO4P61968 AC013488.1-201ENST00000526618 1838 ntBASIC5.17□□□□□ -1.58
LMO4P61968 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.17□□□□□ -1.58
LMO4P61968 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LMO4P61968 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
LMO4P61968 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LMO4P61968 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.17□□□□□ -1.58
LMO4P61968 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.17□□□□□ -1.58
LMO4P61968 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LMO4P61968 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
LMO4P61968 MTCO1P28-201ENST00000574177 1528 ntBASIC5.17□□□□□ -1.58
LMO4P61968 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.17□□□□□ -1.58
LMO4P61968 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LMO4P61968 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LMO4P61968 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LMO4P61968 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LMO4P61968 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
LMO4P61968 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
LMO4P61968 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 CYP2G2P-201ENST00000594920 1485 ntBASIC5.16□□□□□ -1.58
LMO4P61968 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 RNU6-167P-201ENST00000384292 106 ntBASIC5.16□□□□□ -1.58
LMO4P61968 AC092642.1-201ENST00000392417 425 ntBASIC5.16□□□□□ -1.58
LMO4P61968 AC240504.1-201ENST00000395709 845 ntBASIC5.16□□□□□ -1.58
LMO4P61968 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.16□□□□□ -1.58
LMO4P61968 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.16□□□□□ -1.58
LMO4P61968 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 RPS29P14-201ENST00000431518 171 ntBASIC5.16□□□□□ -1.58
LMO4P61968 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 AC013410.1-201ENST00000436223 1232 ntBASIC5.16□□□□□ -1.58
LMO4P61968 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LMO4P61968 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.16□□□□□ -1.58
LMO4P61968 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.16□□□□□ -1.58
LMO4P61968 SNX18P26-201ENST00000458433 740 ntBASIC5.16□□□□□ -1.58
LMO4P61968 AC084754.1-201ENST00000463466 464 ntBASIC5.16□□□□□ -1.58
LMO4P61968 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.16□□□□□ -1.58
LMO4P61968 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.16□□□□□ -1.58
LMO4P61968 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.16□□□□□ -1.58
LMO4P61968 RN7SKP238-201ENST00000516483 249 ntBASIC5.16□□□□□ -1.58
LMO4P61968 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.16□□□□□ -1.58
LMO4P61968 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.16□□□□□ -1.58
LMO4P61968 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.16□□□□□ -1.58
LMO4P61968 AC007956.1-201ENST00000555623 542 ntBASIC5.16□□□□□ -1.58
LMO4P61968 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.16□□□□□ -1.58
LMO4P61968 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.16□□□□□ -1.58
LMO4P61968 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.16□□□□□ -1.58
LMO4P61968 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
LMO4P61968 AP000240.1-201ENST00000609910 452 ntBASIC5.16□□□□□ -1.58
LMO4P61968 AP002345.2-201ENST00000609961 904 ntBASIC5.16□□□□□ -1.58
LMO4P61968 AC006924.1-201ENST00000610750 559 ntBASIC5.16□□□□□ -1.58
LMO4P61968 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 AC073575.2-201ENST00000614212 627 ntBASIC5.16□□□□□ -1.58
LMO4P61968 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.16□□□□□ -1.58
LMO4P61968 AL357153.4-201ENST00000620487 1016 ntBASIC5.16□□□□□ -1.58
LMO4P61968 FO681491.1-202ENST00000623392 737 ntBASIC5.16□□□□□ -1.58
LMO4P61968 AC129778.1-202ENST00000623812 261 ntBASIC5.16□□□□□ -1.58
LMO4P61968 AL591379.1-207ENST00000635982 261 ntBASIC5.16□□□□□ -1.58
LMO4P61968 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.16□□□□□ -1.58
LMO4P61968 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.16□□□□□ -1.58
LMO4P61968 MAPK10-287ENST00000641217 3037 ntBASIC5.16□□□□□ -1.58
LMO4P61968 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
LMO4P61968 GUCY1B2-204ENST00000531898 1979 ntBASIC5.16□□□□□ -1.58
LMO4P61968 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.16□□□□□ -1.58
LMO4P61968 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
LMO4P61968 CASC19-238ENST00000641523 1558 ntBASIC5.16□□□□□ -1.58
LMO4P61968 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LMO4P61968 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LMO4P61968 AP002370.1-201ENST00000528055 1602 ntBASIC5.15□□□□□ -1.58
LMO4P61968 NCOA4P3-201ENST00000513203 1877 ntBASIC5.15□□□□□ -1.58
LMO4P61968 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LMO4P61968 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LMO4P61968 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LMO4P61968 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.15□□□□□ -1.58
LMO4P61968 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
LMO4P61968 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC5.15□□□□□ -1.58
LMO4P61968 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LMO4P61968 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LMO4P61968 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms