Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PDCL3P1-201ENST00000534575 734 ntBASIC5.25□□□□□ -1.57
CD74P04233 MIR4800-201ENST00000537353 80 ntBASIC5.25□□□□□ -1.57
CD74P04233 AC023080.1-201ENST00000551663 931 ntBASIC5.25□□□□□ -1.57
CD74P04233 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.25□□□□□ -1.57
CD74P04233 AC024614.1-201ENST00000577546 307 ntBASIC5.25□□□□□ -1.57
CD74P04233 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.25□□□□□ -1.57
CD74P04233 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.25□□□□□ -1.57
CD74P04233 AC024451.4-201ENST00000602578 752 ntBASIC5.25□□□□□ -1.57
CD74P04233 AL512430.4-201ENST00000603085 613 ntBASIC5.25□□□□□ -1.57
CD74P04233 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.25□□□□□ -1.57
CD74P04233 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CD74P04233 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CD74P04233 MIR7159-201ENST00000620587 66 ntBASIC5.25□□□□□ -1.57
CD74P04233 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CD74P04233 AL161912.4-201ENST00000623889 2468 ntBASIC5.25□□□□□ -1.57
CD74P04233 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CD74P04233 GTF2IP4-201ENST00000453092 2054 ntBASIC5.25□□□□□ -1.57
CD74P04233 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CD74P04233 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CD74P04233 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CD74P04233 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CD74P04233 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD74P04233 QRSL1P3-201ENST00000552666 1316 ntBASIC5.24□□□□□ -1.57
CD74P04233 AC116158.1-201ENST00000560231 2129 ntBASIC5.24□□□□□ -1.57
CD74P04233 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD74P04233 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
CD74P04233 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CD74P04233 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
CD74P04233 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CD74P04233 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.24□□□□□ -1.57
CD74P04233 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD74P04233 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.24□□□□□ -1.57
CD74P04233 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CD74P04233 PPIAP24-201ENST00000328558 471 ntBASIC5.24□□□□□ -1.57
CD74P04233 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CD74P04233 RNA5SP453-201ENST00000362503 119 ntBASIC5.24□□□□□ -1.57
CD74P04233 U3.10-201ENST00000364459 214 ntBASIC5.24□□□□□ -1.57
CD74P04233 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD74P04233 FDPSP5-201ENST00000399474 1057 ntBASIC5.24□□□□□ -1.57
CD74P04233 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CD74P04233 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CD74P04233 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CD74P04233 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.24□□□□□ -1.57
CD74P04233 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.24□□□□□ -1.57
CD74P04233 AC016908.1-201ENST00000442571 1219 ntBASIC5.24□□□□□ -1.57
CD74P04233 AL158214.1-201ENST00000444423 404 ntBASIC5.24□□□□□ -1.57
CD74P04233 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.24□□□□□ -1.57
CD74P04233 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.24□□□□□ -1.57
CD74P04233 CCNJP1-201ENST00000450600 1149 ntBASIC5.24□□□□□ -1.57
CD74P04233 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.24□□□□□ -1.57
CD74P04233 AC073594.1-201ENST00000462065 364 ntBASIC5.24□□□□□ -1.57
CD74P04233 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.24□□□□□ -1.57
CD74P04233 AC090602.1-201ENST00000469695 252 ntBASIC5.24□□□□□ -1.57
CD74P04233 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC5.24□□□□□ -1.57
CD74P04233 AC073648.3-201ENST00000504939 925 ntBASIC5.24□□□□□ -1.57
CD74P04233 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.24□□□□□ -1.57
CD74P04233 TOMM22P4-201ENST00000511318 336 ntBASIC5.24□□□□□ -1.57
CD74P04233 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.24□□□□□ -1.57
CD74P04233 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.24□□□□□ -1.57
CD74P04233 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.24□□□□□ -1.57
CD74P04233 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC5.24□□□□□ -1.57
CD74P04233 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.24□□□□□ -1.57
CD74P04233 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.24□□□□□ -1.57
CD74P04233 AC009729.1-201ENST00000548873 1133 ntBASIC5.24□□□□□ -1.57
CD74P04233 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.24□□□□□ -1.57
CD74P04233 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.24□□□□□ -1.57
CD74P04233 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.24□□□□□ -1.57
CD74P04233 AL589863.1-201ENST00000595383 631 ntBASIC5.24□□□□□ -1.57
CD74P04233 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.24□□□□□ -1.57
CD74P04233 AL121782.1-201ENST00000611242 413 ntBASIC5.24□□□□□ -1.57
CD74P04233 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.24□□□□□ -1.57
CD74P04233 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.24□□□□□ -1.57
CD74P04233 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
CD74P04233 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD74P04233 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD74P04233 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.24□□□□□ -1.57
CD74P04233 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CD74P04233 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CD74P04233 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CD74P04233 RPL31P11-201ENST00000426558 1558 ntBASIC5.24□□□□□ -1.57
CD74P04233 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CD74P04233 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.24□□□□□ -1.57
CD74P04233 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.24□□□□□ -1.57
CD74P04233 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CD74P04233 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD74P04233 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.23□□□□□ -1.57
CD74P04233 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD74P04233 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD74P04233 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD74P04233 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CD74P04233 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.23□□□□□ -1.57
CD74P04233 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD74P04233 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD74P04233 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD74P04233 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD74P04233 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.23□□□□□ -1.57
CD74P04233 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD74P04233 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD74P04233 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD74P04233 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms