Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CCAT2-201ENST00000630920 1752 ntBASIC7.5□□□□□ -1.21
CLIP2Q9UDT6 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
CLIP2Q9UDT6 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.5□□□□□ -1.21
CLIP2Q9UDT6 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CLIP2Q9UDT6 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CLIP2Q9UDT6 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CLIP2Q9UDT6 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.5□□□□□ -1.21
CLIP2Q9UDT6 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AL139805.1-201ENST00000407837 289 ntBASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 RPL6P21-201ENST00000418672 846 ntBASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AC002069.1-201ENST00000429649 1159 ntBASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AC094019.1-201ENST00000434678 472 ntBASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 RPL12P31-201ENST00000478433 450 ntBASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 SNX18P25-201ENST00000510539 758 ntBASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AC108103.1-201ENST00000511286 446 ntBASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AC005363.1-201ENST00000530779 351 ntBASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AC090888.3-201ENST00000558917 509 ntBASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AC124916.2-201ENST00000604416 224 ntBASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AC012254.5-201ENST00000623573 478 ntBASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AC125238.2-201ENST00000430003 1440 ntBASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 CDY3P-201ENST00000454543 1618 ntBASIC7.49□□□□□ -1.21
CLIP2Q9UDT6 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 IFIT1P1-201ENST00000400497 1449 ntBASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 AL023284.3-201ENST00000407767 334 ntBASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 AL355355.1-201ENST00000442900 793 ntBASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 RPL5P10-201ENST00000445207 894 ntBASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 HMGB1P7-201ENST00000450921 612 ntBASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 RN7SL643P-201ENST00000471845 291 ntBASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 AC091965.3-201ENST00000506236 208 ntBASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 SUMO2P19-201ENST00000518920 295 ntBASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 GLYATL1P2-202ENST00000588046 902 ntBASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 AC005332.4-201ENST00000592752 579 ntBASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 MIR6071-201ENST00000616741 78 ntBASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 AP003789.1-201ENST00000617737 605 ntBASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 AP001052.1-201ENST00000626421 99 ntBASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP2Q9UDT6 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.47□□□□□ -1.21
CLIP2Q9UDT6 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.47□□□□□ -1.21
CLIP2Q9UDT6 AC010624.4-201ENST00000597606 1351 ntBASIC7.47□□□□□ -1.21
CLIP2Q9UDT6 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CLIP2Q9UDT6 AP004289.1-201ENST00000436307 2205 ntBASIC7.47□□□□□ -1.21
CLIP2Q9UDT6 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CLIP2Q9UDT6 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CLIP2Q9UDT6 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms