Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC7.56□□□□□ -1.2
RFX7Q2KHR2 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.56□□□□□ -1.2
RFX7Q2KHR2 PRMT5P1-201ENST00000514351 598 ntBASIC7.56□□□□□ -1.2
RFX7Q2KHR2 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.56□□□□□ -1.2
RFX7Q2KHR2 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RFX7Q2KHR2 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.56□□□□□ -1.2
RFX7Q2KHR2 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.56□□□□□ -1.2
RFX7Q2KHR2 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.56□□□□□ -1.2
RFX7Q2KHR2 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.56□□□□□ -1.2
RFX7Q2KHR2 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.56□□□□□ -1.2
RFX7Q2KHR2 FAM27E2-201ENST00000619668 403 ntBASIC7.56□□□□□ -1.2
RFX7Q2KHR2 AC003992.1-201ENST00000635364 557 ntBASIC7.56□□□□□ -1.2
RFX7Q2KHR2 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.56□□□□□ -1.2
RFX7Q2KHR2 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
RFX7Q2KHR2 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RFX7Q2KHR2 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RFX7Q2KHR2 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 Z93929.1-201ENST00000418200 1475 ntBASIC7.55□□□□□ -1.2
RFX7Q2KHR2 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.55□□□□□ -1.2
RFX7Q2KHR2 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 AC004386.1-201ENST00000393214 761 ntBASIC7.55□□□□□ -1.2
RFX7Q2KHR2 RNA5SP251-201ENST00000410614 137 ntBASIC7.55□□□□□ -1.2
RFX7Q2KHR2 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 OR3D1P-201ENST00000438288 955 ntBASIC7.55□□□□□ -1.2
RFX7Q2KHR2 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 AC079922.1-201ENST00000443291 359 ntBASIC7.55□□□□□ -1.2
RFX7Q2KHR2 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 AC007346.1-201ENST00000569208 867 ntBASIC7.55□□□□□ -1.2
RFX7Q2KHR2 RN7SL753P-201ENST00000581238 290 ntBASIC7.55□□□□□ -1.2
RFX7Q2KHR2 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 AL136097.3-201ENST00000611097 505 ntBASIC7.55□□□□□ -1.2
RFX7Q2KHR2 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 AL512652.1-201ENST00000619006 500 ntBASIC7.55□□□□□ -1.2
RFX7Q2KHR2 FO681491.1-202ENST00000623392 737 ntBASIC7.55□□□□□ -1.2
RFX7Q2KHR2 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RFX7Q2KHR2 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 HIGD1AP16-201ENST00000450986 258 ntBASIC7.54□□□□□ -1.2
RFX7Q2KHR2 AL359839.1-201ENST00000451975 1160 ntBASIC7.54□□□□□ -1.2
RFX7Q2KHR2 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 AOX3P-204ENST00000491025 2107 ntBASIC7.54□□□□□ -1.2
RFX7Q2KHR2 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 MIR6862-1-201ENST00000613016 70 ntBASIC7.54□□□□□ -1.2
RFX7Q2KHR2 AL096712.1-201ENST00000614561 159 ntBASIC7.54□□□□□ -1.2
RFX7Q2KHR2 MIR6862-2-201ENST00000614755 70 ntBASIC7.54□□□□□ -1.2
RFX7Q2KHR2 SNX18P12-201ENST00000624821 759 ntBASIC7.54□□□□□ -1.2
RFX7Q2KHR2 ZNF812P-201ENST00000457674 1694 ntBASIC7.54□□□□□ -1.2
RFX7Q2KHR2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RFX7Q2KHR2 LYARP1-201ENST00000436977 1501 ntBASIC7.54□□□□□ -1.2
RFX7Q2KHR2 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 AP003486.1-201ENST00000525716 3994 ntBASIC7.53□□□□□ -1.2
RFX7Q2KHR2 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX7Q2KHR2 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms