Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.64□□□□□ -1.51
MSR1P21757 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.64□□□□□ -1.51
MSR1P21757 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.64□□□□□ -1.51
MSR1P21757 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.64□□□□□ -1.51
MSR1P21757 AL121579.2-201ENST00000555466 590 ntBASIC5.64□□□□□ -1.51
MSR1P21757 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.64□□□□□ -1.51
MSR1P21757 AC009120.3-201ENST00000563335 499 ntBASIC5.64□□□□□ -1.51
MSR1P21757 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.64□□□□□ -1.51
MSR1P21757 AC133552.4-201ENST00000576103 676 ntBASIC5.64□□□□□ -1.51
MSR1P21757 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.64□□□□□ -1.51
MSR1P21757 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.64□□□□□ -1.51
MSR1P21757 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.64□□□□□ -1.51
MSR1P21757 AC024589.2-201ENST00000605642 1294 ntBASIC5.64□□□□□ -1.51
MSR1P21757 AL589743.6-201ENST00000611025 117 ntBASIC5.64□□□□□ -1.51
MSR1P21757 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
MSR1P21757 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
MSR1P21757 AC006511.3-201ENST00000624929 1783 ntBASIC5.64□□□□□ -1.51
MSR1P21757 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.64□□□□□ -1.51
MSR1P21757 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MSR1P21757 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MSR1P21757 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.64□□□□□ -1.51
MSR1P21757 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
MSR1P21757 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.64□□□□□ -1.51
MSR1P21757 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
MSR1P21757 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
MSR1P21757 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MSR1P21757 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MSR1P21757 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MSR1P21757 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MSR1P21757 AC027279.4-201ENST00000624371 2072 ntBASIC5.63□□□□□ -1.51
MSR1P21757 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
MSR1P21757 AC007159.1-201ENST00000566529 4706 ntBASIC5.63□□□□□ -1.51
MSR1P21757 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
MSR1P21757 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MSR1P21757 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MSR1P21757 AL355377.1-201ENST00000621125 1653 ntBASIC5.63□□□□□ -1.51
MSR1P21757 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MSR1P21757 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
MSR1P21757 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
MSR1P21757 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MSR1P21757 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MSR1P21757 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MSR1P21757 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
MSR1P21757 ARSFP1-201ENST00000398758 477 ntBASIC5.63□□□□□ -1.51
MSR1P21757 AL033519.1-201ENST00000407266 307 ntBASIC5.63□□□□□ -1.51
MSR1P21757 RPL23AP18-201ENST00000416139 468 ntBASIC5.63□□□□□ -1.51
MSR1P21757 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MSR1P21757 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.63□□□□□ -1.51
MSR1P21757 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.63□□□□□ -1.51
MSR1P21757 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.63□□□□□ -1.51
MSR1P21757 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.63□□□□□ -1.51
MSR1P21757 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.63□□□□□ -1.51
MSR1P21757 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
MSR1P21757 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.63□□□□□ -1.51
MSR1P21757 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
MSR1P21757 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.63□□□□□ -1.51
MSR1P21757 CASP1P2-201ENST00000526830 1258 ntBASIC5.63□□□□□ -1.51
MSR1P21757 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.63□□□□□ -1.51
MSR1P21757 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.63□□□□□ -1.51
MSR1P21757 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.63□□□□□ -1.51
MSR1P21757 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.63□□□□□ -1.51
MSR1P21757 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.63□□□□□ -1.51
MSR1P21757 AL390877.1-201ENST00000605704 214 ntBASIC5.63□□□□□ -1.51
MSR1P21757 AC024255.1-201ENST00000614376 102 ntBASIC5.63□□□□□ -1.51
MSR1P21757 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.63□□□□□ -1.51
MSR1P21757 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
MSR1P21757 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MSR1P21757 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MSR1P21757 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.63□□□□□ -1.51
MSR1P21757 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
MSR1P21757 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MSR1P21757 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MSR1P21757 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MSR1P21757 MSL3P1-202ENST00000440028 1468 ntBASIC5.63□□□□□ -1.51
MSR1P21757 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.63□□□□□ -1.51
MSR1P21757 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.63□□□□□ -1.51
MSR1P21757 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.63□□□□□ -1.51
MSR1P21757 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MSR1P21757 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
MSR1P21757 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
MSR1P21757 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.62□□□□□ -1.51
MSR1P21757 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.62□□□□□ -1.51
MSR1P21757 GTF2IP4-201ENST00000453092 2054 ntBASIC5.62□□□□□ -1.51
MSR1P21757 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MSR1P21757 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MSR1P21757 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.62□□□□□ -1.51
MSR1P21757 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MSR1P21757 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MSR1P21757 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.62□□□□□ -1.51
MSR1P21757 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.62□□□□□ -1.51
MSR1P21757 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.62□□□□□ -1.51
MSR1P21757 SNORD35A-201ENST00000363389 86 ntBASIC5.62□□□□□ -1.51
MSR1P21757 SNORA70H-201ENST00000383910 135 ntBASIC5.62□□□□□ -1.51
MSR1P21757 SNORA70J-201ENST00000384182 135 ntBASIC5.62□□□□□ -1.51
MSR1P21757 RN7SKP161-201ENST00000411110 305 ntBASIC5.62□□□□□ -1.51
MSR1P21757 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.62□□□□□ -1.51
MSR1P21757 GPN3P1-201ENST00000423883 535 ntBASIC5.62□□□□□ -1.51
MSR1P21757 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MSR1P21757 AC009237.1-201ENST00000442127 744 ntBASIC5.62□□□□□ -1.51
MSR1P21757 OR13K1P-201ENST00000444577 975 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms