Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SCG5-207ENST00000497208 949 ntTSL 5 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AC106800.3-201ENST00000511389 308 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AC020937.1-201ENST00000519677 1013 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AC008429.2-201ENST00000523057 864 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AL132640.1-201ENST00000559594 619 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AL132640.2-202ENST00000559732 614 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 OR4H6P-201ENST00000563771 921 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AC093635.1-201ENST00000609028 555 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AP001264.1-201ENST00000620602 703 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 MIR665-201ENST00000635949 72 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AC135068.11-201ENST00000636378 921 ntBASIC4.71□□□□□ -1.66
AP1S3Q96PC3 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC4.71□□□□□ -1.66
AP1S3Q96PC3 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 AL132656.3-201ENST00000606384 1595 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 VTRNA3-1P-201ENST00000362552 102 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 RN7SKP236-201ENST00000410635 284 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 U3.43-201ENST00000410734 213 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 RPL12P18-201ENST00000437175 325 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 AL022237.1-201ENST00000446663 358 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 AC103563.5-201ENST00000455643 364 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 NDUFB4P1-201ENST00000462398 381 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 PDPN-205ENST00000487038 607 ntTSL 2 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 RN7SL445P-201ENST00000495609 293 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 AC131392.1-201ENST00000506490 633 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 IGKV2D-38-201ENST00000518423 240 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 CASC11-203ENST00000519071 791 ntTSL 3 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 ANP32BP1-202ENST00000568553 737 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 LAPTM4BP2-201ENST00000604542 446 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 AL592504.1-201ENST00000605319 439 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 AC104117.5-201ENST00000606195 547 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 Z95327.3-201ENST00000610385 572 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 MIR7854-201ENST00000620068 65 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 BX005040.2-201ENST00000620504 370 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 TEX41-271ENST00000628213 993 ntTSL 5 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 GUCY1B2-204ENST00000531898 1979 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 AL121768.1-201ENST00000613917 2544 ntBASIC4.7□□□□□ -1.66
AP1S3Q96PC3 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
AP1S3Q96PC3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.69□□□□□ -1.66
AP1S3Q96PC3 AP000542.2-201ENST00000623199 6179 ntBASIC4.69□□□□□ -1.66
AP1S3Q96PC3 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms