RNA–Protein interactions for RNA: ENST00000499666.6

LAMTOR3-202, Transcript of late endosomal/lysosomal adaptor, MAPK and MTOR activator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMTOR3, Length 4,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMTOR3-202ENST00000499666 NISCHQ9Y2I1 1504 aa11.65□□□□□ -0.54
LAMTOR3-202ENST00000499666 DCAF8L2P0C7V8 631 aa10.89□□□□□ -0.67
LAMTOR3-202ENST00000499666 SHROOM4Q9ULL8 1493 aa10.45□□□□□ -0.74
LAMTOR3-202ENST00000499666 SUPT5HO00267 1087 aaKnown RBP10.34□□□□□ -0.75
LAMTOR3-202ENST00000499666 ABCC9O60706 1549 aa9.88□□□□□ -0.83
LAMTOR3-202ENST00000499666 CCDC180Q9P1Z9 1646 aa9.77□□□□□ -0.85
LAMTOR3-202ENST00000499666 EHMT2Q96KQ7 1210 aa9.76□□□□□ -0.85
LAMTOR3-202ENST00000499666 ZCCHC6Q5VYS8 1495 aaKnown RBP9.7□□□□□ -0.86
LAMTOR3-202ENST00000499666 FAM9AQ8IZU1 332 aaPredicted RBP9.66□□□□□ -0.86
LAMTOR3-202ENST00000499666 PABPN1Q86U42 306 aaKnown RBP eCLIP9.61□□□□□ -0.87
LAMTOR3-202ENST00000499666 TRIM41Q8WV44 630 aa9.6□□□□□ -0.87
LAMTOR3-202ENST00000499666 SCRIBQ14160 1630 aa9.5□□□□□ -0.89
LAMTOR3-202ENST00000499666 CHIC1Q5VXU3 224 aa9.5□□□□□ -0.89
LAMTOR3-202ENST00000499666 RANGAP1P46060 587 aaPredicted RBP9.39□□□□□ -0.91
LAMTOR3-202ENST00000499666 TTBK1Q5TCY1 1321 aaPredicted RBP9.36□□□□□ -0.91
LAMTOR3-202ENST00000499666 LOC105371045A0A1W2PR82 267 aa9.36□□□□□ -0.91
LAMTOR3-202ENST00000499666 PCGF6Q9BYE7 350 aa9.35□□□□□ -0.91
LAMTOR3-202ENST00000499666 UBTFP17480 764 aaKnown RBP9.35□□□□□ -0.91
LAMTOR3-202ENST00000499666 RB1CC1Q8TDY2 1594 aa9.34□□□□□ -0.91
LAMTOR3-202ENST00000499666 DCAF1Q9Y4B6 1507 aa9.34□□□□□ -0.91
LAMTOR3-202ENST00000499666 NACADO15069 1562 aa9.33□□□□□ -0.92
LAMTOR3-202ENST00000499666 APLP2Q06481 763 aa9.33□□□□□ -0.92
LAMTOR3-202ENST00000499666 PPARGC1BQ86YN6 1023 aaKnown RBP9.23□□□□□ -0.93
LAMTOR3-202ENST00000499666 RSF1Q96T23 1441 aaPredicted RBP9.22□□□□□ -0.93
LAMTOR3-202ENST00000499666 ATP1B4Q9UN42 357 aaPredicted RBP9.18□□□□□ -0.94
LAMTOR3-202ENST00000499666 CECR2Q9BXF3 1484 aa9.17□□□□□ -0.94
LAMTOR3-202ENST00000499666 MYO15BQ96JP2 1530 aa9.13□□□□□ -0.95
LAMTOR3-202ENST00000499666 TRIM26Q12899 539 aaPredicted RBP9.08□□□□□ -0.96
LAMTOR3-202ENST00000499666 BAZ1AQ9NRL2 1556 aaPredicted RBP9.07□□□□□ -0.96
LAMTOR3-202ENST00000499666 MROH2BQ7Z745 1585 aa9.05□□□□□ -0.96
LAMTOR3-202ENST00000499666 CCER1Q8TC90 406 aaPredicted RBP9.05□□□□□ -0.96
LAMTOR3-202ENST00000499666 CSRNP3Q8WYN3 585 aa9.03□□□□□ -0.96
LAMTOR3-202ENST00000499666 BAZ1BQ9UIG0 1483 aaKnown RBP9□□□□□ -0.97
LAMTOR3-202ENST00000499666 ZEB1P37275 1124 aaPredicted RBP8.95□□□□□ -0.98
LAMTOR3-202ENST00000499666 ITGAEP38570 1179 aa8.95□□□□□ -0.98
LAMTOR3-202ENST00000499666 WIZO95785 1651 aa8.94□□□□□ -0.98
LAMTOR3-202ENST00000499666 HNRNPUL2Q1KMD3 747 aaKnown RBP8.94□□□□□ -0.98
LAMTOR3-202ENST00000499666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.93□□□□□ -0.98
LAMTOR3-202ENST00000499666 HRCP23327 699 aa8.91□□□□□ -0.98
LAMTOR3-202ENST00000499666 CCDC88BA6NC98 1476 aa8.9□□□□□ -0.98
LAMTOR3-202ENST00000499666 WRNQ14191 1432 aaPredicted RBP eCLIP8.89□□□□□ -0.99
LAMTOR3-202ENST00000499666 FBLN2P98095 1184 aa8.88□□□□□ -0.99
LAMTOR3-202ENST00000499666 P3H3Q8IVL6 736 aa8.88□□□□□ -0.99
LAMTOR3-202ENST00000499666 SMARCA4P51532 1647 aa8.86□□□□□ -0.99
LAMTOR3-202ENST00000499666 SMARCA2P51531 1590 aa8.84□□□□□ -0.99
LAMTOR3-202ENST00000499666 TOP2AP11388 1531 aaKnown RBP8.84□□□□□ -0.99
LAMTOR3-202ENST00000499666 ATAD2BQ9ULI0 1458 aa8.83□□□□□ -1
LAMTOR3-202ENST00000499666 ABCC8Q09428 1581 aa8.82□□□□□ -1
LAMTOR3-202ENST00000499666 FAM50AQ14320 339 aaKnown RBP8.8□□□□□ -1
LAMTOR3-202ENST00000499666 SOGA1O94964 1423 aa8.79□□□□□ -1
LAMTOR3-202ENST00000499666 EEA1Q15075 1411 aa8.78□□□□□ -1
LAMTOR3-202ENST00000499666 ARID3CA6NKF2 412 aa8.78□□□□□ -1
LAMTOR3-202ENST00000499666 GOLGA3Q08378 1498 aa8.74□□□□□ -1.01
LAMTOR3-202ENST00000499666 CLIP1P30622 1438 aa8.74□□□□□ -1.01
LAMTOR3-202ENST00000499666 CEP162Q5TB80 1403 aa8.73□□□□□ -1.01
LAMTOR3-202ENST00000499666 KIF27Q86VH2 1401 aa8.73□□□□□ -1.01
LAMTOR3-202ENST00000499666 MYT1LQ9UL68 1186 aa8.71□□□□□ -1.02
LAMTOR3-202ENST00000499666 TNIKQ9UKE5 1360 aa8.7□□□□□ -1.02
LAMTOR3-202ENST00000499666 CADPSQ9ULU8 1353 aa8.7□□□□□ -1.02
LAMTOR3-202ENST00000499666 CEP164Q9UPV0 1460 aa8.7□□□□□ -1.02
LAMTOR3-202ENST00000499666 EIF4G1Q04637 1599 aaKnown RBP8.69□□□□□ -1.02
LAMTOR3-202ENST00000499666 BICRAQ9NZM4 1560 aa8.69□□□□□ -1.02
LAMTOR3-202ENST00000499666 CUX2O14529 1486 aa8.68□□□□□ -1.02
LAMTOR3-202ENST00000499666 CHMP7Q8WUX9 453 aaPredicted RBP8.67□□□□□ -1.02
LAMTOR3-202ENST00000499666 NCAPD3P42695 1498 aa8.66□□□□□ -1.02
LAMTOR3-202ENST00000499666 ERCC6Q03468 1493 aa8.66□□□□□ -1.02
LAMTOR3-202ENST00000499666 TRIM52Q96A61 297 aa8.64□□□□□ -1.03
LAMTOR3-202ENST00000499666 RUSC2Q8N2Y8 1516 aa8.63□□□□□ -1.03
LAMTOR3-202ENST00000499666 PDS5BQ9NTI5 1447 aa8.63□□□□□ -1.03
LAMTOR3-202ENST00000499666 CARMIL1Q5VZK9 1371 aa8.63□□□□□ -1.03
LAMTOR3-202ENST00000499666 NEUROD1Q13562 356 aa8.63□□□□□ -1.03
LAMTOR3-202ENST00000499666 UNC13AQ9UPW8 1703 aa8.62□□□□□ -1.03
LAMTOR3-202ENST00000499666 YTHDC1Q96MU7 727 aaKnown RBP8.62□□□□□ -1.03
LAMTOR3-202ENST00000499666 TDRD9Q8NDG6 1382 aaKnown RBP8.61□□□□□ -1.03
LAMTOR3-202ENST00000499666 ZNF777Q9ULD5 760 aaPredicted RBP8.61□□□□□ -1.03
LAMTOR3-202ENST00000499666 CDK11AQ9UQ88 783 aaPredicted RBP8.6□□□□□ -1.03
LAMTOR3-202ENST00000499666 CENPBP07199 599 aaPredicted RBP8.59□□□□□ -1.03
LAMTOR3-202ENST00000499666 FANCD2Q9BXW9 1451 aa8.58□□□□□ -1.04
LAMTOR3-202ENST00000499666 MTUS2Q5JR59 1369 aa8.58□□□□□ -1.04
LAMTOR3-202ENST00000499666 CC2D2AQ9P2K1 1620 aa8.55□□□□□ -1.04
LAMTOR3-202ENST00000499666 RAPGEF2Q9Y4G8 1499 aa8.55□□□□□ -1.04
LAMTOR3-202ENST00000499666 DIEXFQ68CQ4 756 aaKnown RBP8.55□□□□□ -1.04
LAMTOR3-202ENST00000499666 POLR3GLQ9BT43 218 aa8.55□□□□□ -1.04
LAMTOR3-202ENST00000499666 CHIC2Q9UKJ5 165 aa8.54□□□□□ -1.04
LAMTOR3-202ENST00000499666 HMGXB3Q12766 1538 aa8.52□□□□□ -1.05
LAMTOR3-202ENST00000499666 CFTRP13569 1480 aa8.52□□□□□ -1.05
LAMTOR3-202ENST00000499666 DNAJC5BQ9UF47 199 aa8.52□□□□□ -1.05
LAMTOR3-202ENST00000499666 VPS8Q8N3P4 1428 aa8.51□□□□□ -1.05
LAMTOR3-202ENST00000499666 NESP48681 1621 aa8.51□□□□□ -1.05
LAMTOR3-202ENST00000499666 CNGB1Q14028 1251 aaPredicted RBP8.51□□□□□ -1.05
LAMTOR3-202ENST00000499666 FGD5Q6ZNL6 1462 aa8.5□□□□□ -1.05
LAMTOR3-202ENST00000499666 SYNJ1O43426 1573 aa8.5□□□□□ -1.05
LAMTOR3-202ENST00000499666 KANK4Q5T7N3 995 aaPredicted RBP8.49□□□□□ -1.05
LAMTOR3-202ENST00000499666 ZNF326Q5BKZ1 582 aaKnown RBP8.49□□□□□ -1.05
LAMTOR3-202ENST00000499666 RAD54L2Q9Y4B4 1467 aa8.49□□□□□ -1.05
LAMTOR3-202ENST00000499666 ZNF316A6NFI3 1004 aaPredicted RBP8.48□□□□□ -1.05
LAMTOR3-202ENST00000499666 FHAD1B1AJZ9 1412 aa8.47□□□□□ -1.05
LAMTOR3-202ENST00000499666 IGF1RP08069 1367 aa8.47□□□□□ -1.05
LAMTOR3-202ENST00000499666 PEG3Q9GZU2 1588 aa8.46□□□□□ -1.05
LAMTOR3-202ENST00000499666 PLEKHD1A6NEE1 506 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms