Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 MIR548XHG-201ENST00000355189 673 ntTSL 3 BASIC8.73□□□□□ -1.01
COL9A1P20849 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC8.73□□□□□ -1.01
COL9A1P20849 SNORA30-201ENST00000384028 129 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 RN7SKP240-201ENST00000410583 375 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 RNU6-373P-201ENST00000411247 98 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 AC010385.1-201ENST00000412374 256 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC8.73□□□□□ -1.01
COL9A1P20849 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 PIGFP2-201ENST00000421400 651 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 RPL35AP12-201ENST00000425362 338 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC8.73□□□□□ -1.01
COL9A1P20849 FO393419.3-201ENST00000428741 282 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 RPS10P2-201ENST00000430953 494 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 CYCSP11-201ENST00000436426 315 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 LSM3P3-201ENST00000436601 306 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC8.73□□□□□ -1.01
COL9A1P20849 GTF2IP13-201ENST00000438487 386 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 HMGB3P12-201ENST00000438745 556 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 SUMO1P3-201ENST00000439961 304 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 AC027124.1-201ENST00000440852 466 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 AC023512.1-201ENST00000444513 499 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC8.73□□□□□ -1.01
COL9A1P20849 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC8.73□□□□□ -1.01
COL9A1P20849 ACTR3P3-201ENST00000480448 893 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 DYNLL1P6-201ENST00000503440 264 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 MRPL57P6-201ENST00000506570 309 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 AC103851.1-201ENST00000506833 274 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 AC108064.1-201ENST00000513791 460 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 RN7SKP31-201ENST00000516354 278 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC8.73□□□□□ -1.01
COL9A1P20849 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC8.73□□□□□ -1.01
COL9A1P20849 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC8.73□□□□□ -1.01
COL9A1P20849 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC8.73□□□□□ -1.01
COL9A1P20849 AC090424.1-201ENST00000535243 736 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 AC107958.1-201ENST00000556576 290 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 GTF2IP8-201ENST00000560687 584 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 AC010653.1-201ENST00000571108 881 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 MIR5697-201ENST00000578045 78 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 CD300LF-208ENST00000581500 720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 AC011840.5-201ENST00000582125 771 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC8.73□□□□□ -1.01
COL9A1P20849 OR7E19P-202ENST00000589942 844 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 DYNLL1P1-201ENST00000595442 269 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 MTCO2P22-201ENST00000603246 681 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 AC018695.5-201ENST00000605872 315 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC8.73□□□□□ -1.01
COL9A1P20849 PNMA8C-201ENST00000617053 4255 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
COL9A1P20849 ANKRD26P2-201ENST00000445530 1710 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 UBLCP1-201ENST00000296786 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 AL133355.1-201ENST00000568017 2388 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 AC011379.1-201ENST00000508713 3025 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 EIF2A-203ENST00000460851 2198 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 HK1-203ENST00000360289 3961 ntTSL 5 BASIC8.73□□□□□ -1.01
COL9A1P20849 ITGB6-211ENST00000620391 4401 ntTSL 3 BASIC8.73□□□□□ -1.01
COL9A1P20849 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC8.73□□□□□ -1.01
COL9A1P20849 AL008721.2-201ENST00000609475 3754 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 SCMH1-202ENST00000337495 3108 ntTSL 2 BASIC8.73□□□□□ -1.01
COL9A1P20849 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 GRM7-204ENST00000402647 2034 ntTSL 5 BASIC8.73□□□□□ -1.01
COL9A1P20849 AL353132.1-201ENST00000415260 2043 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC8.73□□□□□ -1.01
COL9A1P20849 AC132825.3-201ENST00000562182 4710 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 AC011447.7-201ENST00000624228 1590 ntBASIC8.73□□□□□ -1.01
COL9A1P20849 ZNF592-203ENST00000560079 8131 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 LOXHD1-211ENST00000579038 3632 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 SLC24A4-205ENST00000532405 9950 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 TMEM52B-201ENST00000298530 2731 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC8.73□□□□□ -1.01
COL9A1P20849 LINC00909-202ENST00000580048 3463 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
COL9A1P20849 AC009403.2-202ENST00000636307 3956 ntTSL 5 BASIC8.72□□□□□ -1.01
COL9A1P20849 NUTM1-201ENST00000333756 3795 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
COL9A1P20849 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
COL9A1P20849 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
COL9A1P20849 ZNF91-201ENST00000300619 5489 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
COL9A1P20849 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
COL9A1P20849 CKAP2-201ENST00000258607 3375 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
COL9A1P20849 AC078881.1-201ENST00000507023 2161 ntTSL 2 BASIC8.72□□□□□ -1.01
COL9A1P20849 LAMA1-201ENST00000389658 9657 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
COL9A1P20849 EIF5A2-201ENST00000295822 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
COL9A1P20849 CALD1-202ENST00000361901 4114 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
COL9A1P20849 ATF7IP-221ENST00000543189 4887 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
COL9A1P20849 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
COL9A1P20849 MROH7-203ENST00000395690 3413 ntTSL 5 BASIC8.72□□□□□ -1.01
COL9A1P20849 MARCH1-214ENST00000514618 3903 ntTSL 5 BASIC8.72□□□□□ -1.01
COL9A1P20849 CAST-244ENST00000515663 1473 ntTSL 2 BASIC8.72□□□□□ -1.01
COL9A1P20849 HSPD1P1-201ENST00000503199 1726 ntBASIC8.72□□□□□ -1.01
COL9A1P20849 DEPDC5-206ENST00000400249 5458 ntTSL 5 BASIC8.72□□□□□ -1.01
COL9A1P20849 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
COL9A1P20849 ANKRD13C-202ENST00000370944 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
COL9A1P20849 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms