Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC005017.1-201ENST00000482002 490 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 KCTD9P6-201ENST00000522306 950 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 AC124891.1-201ENST00000536322 519 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 AC009120.3-201ENST00000563335 499 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 AC073046.2-201ENST00000604756 527 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 AL137246.1-201ENST00000607072 977 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 AL008723.3-201ENST00000608926 449 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 AL596275.2-208ENST00000641192 594 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 BRD7P6-201ENST00000431406 1860 ntBASIC6.44□□□□□ -1.38
HLA-DPA1P20036 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DPA1P20036 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 RPL21P50-201ENST00000417698 477 ntBASIC6.43□□□□□ -1.38
HLA-DPA1P20036 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 RPL34P27-201ENST00000428810 349 ntBASIC6.43□□□□□ -1.38
HLA-DPA1P20036 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 RPL9P15-201ENST00000491096 532 ntBASIC6.43□□□□□ -1.38
HLA-DPA1P20036 USP9YP2-201ENST00000504503 1000 ntBASIC6.43□□□□□ -1.38
HLA-DPA1P20036 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 USP9YP1-201ENST00000513521 1002 ntBASIC6.43□□□□□ -1.38
HLA-DPA1P20036 AC009729.1-201ENST00000548873 1133 ntBASIC6.43□□□□□ -1.38
HLA-DPA1P20036 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 MIR3157-201ENST00000578688 85 ntBASIC6.43□□□□□ -1.38
HLA-DPA1P20036 AC026898.1-201ENST00000586404 571 ntBASIC6.43□□□□□ -1.38
HLA-DPA1P20036 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 AC087468.1-201ENST00000604365 630 ntBASIC6.43□□□□□ -1.38
HLA-DPA1P20036 SNORA74.4-201ENST00000607595 199 ntBASIC6.43□□□□□ -1.38
HLA-DPA1P20036 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 AC015819.1-201ENST00000613588 663 ntBASIC6.43□□□□□ -1.38
HLA-DPA1P20036 GAPDHP41-201ENST00000613707 975 ntBASIC6.43□□□□□ -1.38
HLA-DPA1P20036 AC024255.1-201ENST00000614376 102 ntBASIC6.43□□□□□ -1.38
HLA-DPA1P20036 AL445649.1-201ENST00000615941 691 ntBASIC6.43□□□□□ -1.38
HLA-DPA1P20036 AC004836.1-201ENST00000623032 634 ntBASIC6.43□□□□□ -1.38
HLA-DPA1P20036 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 MAPK10-287ENST00000641217 3037 ntBASIC6.43□□□□□ -1.38
HLA-DPA1P20036 MIPEPP2-201ENST00000422560 1819 ntBASIC6.43□□□□□ -1.38
HLA-DPA1P20036 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DPA1P20036 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 SNORD8-201ENST00000363915 110 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 SNORA64.3-201ENST00000365647 134 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 RN7SKP129-201ENST00000410288 299 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms