RNA–Protein interactions for RNA: ENST00000613707.1

GAPDHP41-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 41, humanhuman

BASIC

Gene GAPDHP41, Length 975 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP41-201ENST00000613707 AEBP2Q6ZN18 517 aaPredicted RBP30.16■■■□□ 2.42
GAPDHP41-201ENST00000613707 CHIC1Q5VXU3 224 aa29.36■■■□□ 2.29
GAPDHP41-201ENST00000613707 PHF23Q9BUL5 403 aaPredicted RBP25.77■■□□□ 1.72
GAPDHP41-201ENST00000613707 SENP3Q9H4L4 574 aaPredicted RBP25.65■■□□□ 1.7
GAPDHP41-201ENST00000613707 PLPPR3Q6T4P5 718 aa23.81■■□□□ 1.4
GAPDHP41-201ENST00000613707 FOXD1Q16676 465 aa23.79■■□□□ 1.4
GAPDHP41-201ENST00000613707 ADRA2BP18089 450 aa22.79■■□□□ 1.24
GAPDHP41-201ENST00000613707 PPP6R1Q9UPN7 881 aa22.79■■□□□ 1.24
GAPDHP41-201ENST00000613707 PIAS4Q8N2W9 510 aaPredicted RBP22.46■■□□□ 1.19
GAPDHP41-201ENST00000613707 MSH5O43196 834 aa22.02■■□□□ 1.12
GAPDHP41-201ENST00000613707 PPP4R3CPQ6ZMV5 832 aa20.96■□□□□ 0.95
GAPDHP41-201ENST00000613707 SCAF1Q9H7N4 1312 aaKnown RBP20.88■□□□□ 0.93
GAPDHP41-201ENST00000613707 MAPK8IP2Q13387 824 aaPredicted RBP20.7■□□□□ 0.9
GAPDHP41-201ENST00000613707 DMRT2Q9Y5R5 561 aa20.44■□□□□ 0.86
GAPDHP41-201ENST00000613707 NCBP3Q53F19 620 aaKnown RBP20.41■□□□□ 0.86
GAPDHP41-201ENST00000613707 CNKSR2Q8WXI2 1034 aa20.4■□□□□ 0.86
GAPDHP41-201ENST00000613707 KCNA4P22459 653 aa20.33■□□□□ 0.85
GAPDHP41-201ENST00000613707 POTEDQ86YR6 584 aa20.24■□□□□ 0.83
GAPDHP41-201ENST00000613707 NPM3O75607 178 aaKnown RBP20.07■□□□□ 0.8
GAPDHP41-201ENST00000613707 RNF216Q9NWF9 866 aaPredicted RBP20.02■□□□□ 0.8
GAPDHP41-201ENST00000613707 HOXD11P31277 338 aaPredicted RBP19.95■□□□□ 0.78
GAPDHP41-201ENST00000613707 DCAF8L1A6NGE4 600 aa19.65■□□□□ 0.74
GAPDHP41-201ENST00000613707 DNAJC5BQ9UF47 199 aa19.44■□□□□ 0.7
GAPDHP41-201ENST00000613707 SLC4A1APQ9BWU0 796 aaKnown RBP19.37■□□□□ 0.69
GAPDHP41-201ENST00000613707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.09■□□□□ 0.65
GAPDHP41-201ENST00000613707 SLC4A2P04920 1241 aa18.96■□□□□ 0.63
GAPDHP41-201ENST00000613707 RNF39Q9H2S5 420 aa18.83■□□□□ 0.6
GAPDHP41-201ENST00000613707 FOXD4L1Q9NU39 408 aa18.77■□□□□ 0.6
GAPDHP41-201ENST00000613707 U3KPZ7 1027 aaPredicted RBP18.72■□□□□ 0.59
GAPDHP41-201ENST00000613707 EHMT2Q96KQ7 1210 aa18.71■□□□□ 0.59
GAPDHP41-201ENST00000613707 ZBTB22O15209 634 aa18.69■□□□□ 0.58
GAPDHP41-201ENST00000613707 C1QBPQ07021 282 aaKnown RBP18.61■□□□□ 0.57
GAPDHP41-201ENST00000613707 MYCNP04198 464 aaPredicted RBP18.57■□□□□ 0.56
GAPDHP41-201ENST00000613707 CACNB1Q02641 598 aaPredicted RBP18.48■□□□□ 0.55
GAPDHP41-201ENST00000613707 CSRNP3Q8WYN3 585 aa18.48■□□□□ 0.55
GAPDHP41-201ENST00000613707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.47■□□□□ 0.55
GAPDHP41-201ENST00000613707 HNRNPUL2Q1KMD3 747 aaKnown RBP18.47■□□□□ 0.55
GAPDHP41-201ENST00000613707 SAMD1Q6SPF0 538 aaPredicted RBP18.4■□□□□ 0.54
GAPDHP41-201ENST00000613707 APLP2Q06481 763 aa18.33■□□□□ 0.52
GAPDHP41-201ENST00000613707 SPINK5Q9NQ38 1064 aaPredicted RBP18.24■□□□□ 0.51
GAPDHP41-201ENST00000613707 CAPN15O75808 1086 aa18.22■□□□□ 0.51
GAPDHP41-201ENST00000613707 ATXN8OSP0DMR3 200 aa18.1■□□□□ 0.49
GAPDHP41-201ENST00000613707 TRHP20396 242 aaPredicted RBP18.1■□□□□ 0.49
GAPDHP41-201ENST00000613707 ZNF219Q9P2Y4 722 aaPredicted RBP18.08■□□□□ 0.48
GAPDHP41-201ENST00000613707 ATF5Q9Y2D1 282 aaPredicted RBP18.05■□□□□ 0.48
GAPDHP41-201ENST00000613707 DSG3P32926 999 aa17.88■□□□□ 0.45
GAPDHP41-201ENST00000613707 ABCB7O75027 752 aa17.85■□□□□ 0.45
GAPDHP41-201ENST00000613707 POLA2Q14181 598 aa17.75■□□□□ 0.43
GAPDHP41-201ENST00000613707 ZBTB12Q9Y330 459 aaPredicted RBP17.47■□□□□ 0.39
GAPDHP41-201ENST00000613707 FBLN2P98095 1184 aa17.36■□□□□ 0.37
GAPDHP41-201ENST00000613707 MKRN4PQ13434 485 aaPredicted RBP17.25■□□□□ 0.35
GAPDHP41-201ENST00000613707 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
GAPDHP41-201ENST00000613707 RBM42Q9BTD8 480 aaKnown RBP17.09■□□□□ 0.33
GAPDHP41-201ENST00000613707 SPDYE2BA6NHP3 402 aa16.97■□□□□ 0.31
GAPDHP41-201ENST00000613707 SPDYE6P0CI01 402 aa16.97■□□□□ 0.31
GAPDHP41-201ENST00000613707 SPDYE2Q495Y8 402 aa16.97■□□□□ 0.31
GAPDHP41-201ENST00000613707 ZNF692Q9BU19 519 aaPredicted RBP16.9■□□□□ 0.3
GAPDHP41-201ENST00000613707 SPDYE4A6NLX3 237 aa16.86■□□□□ 0.29
GAPDHP41-201ENST00000613707 AKT1S1Q96B36 256 aa16.83■□□□□ 0.28
GAPDHP41-201ENST00000613707 NISCHQ9Y2I1 1504 aa16.8■□□□□ 0.28
GAPDHP41-201ENST00000613707 SSUH2Q9Y2M2 353 aa16.8■□□□□ 0.28
GAPDHP41-201ENST00000613707 FKBP8Q14318 412 aa16.77■□□□□ 0.28
GAPDHP41-201ENST00000613707 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
GAPDHP41-201ENST00000613707 REM2Q8IYK8 340 aaPredicted RBP16.66■□□□□ 0.26
GAPDHP41-201ENST00000613707 SPDYE1Q8NFV5 336 aaPredicted RBP16.5■□□□□ 0.23
GAPDHP41-201ENST00000613707 PROM2Q8N271 834 aa16.49■□□□□ 0.23
GAPDHP41-201ENST00000613707 PITPNM1O00562 1244 aa16.48■□□□□ 0.23
GAPDHP41-201ENST00000613707 CLEC11AQ9Y240 323 aa16.47■□□□□ 0.23
GAPDHP41-201ENST00000613707 CHRDL2Q6WN34 429 aa16.41■□□□□ 0.22
GAPDHP41-201ENST00000613707 STAG3Q9UJ98 1225 aa16.37■□□□□ 0.21
GAPDHP41-201ENST00000613707 PRR29P0C7W0 189 aa16.29■□□□□ 0.2
GAPDHP41-201ENST00000613707 FBXO3Q9UK99 471 aa16.21■□□□□ 0.19
GAPDHP41-201ENST00000613707 FXR2P51116 673 aaKnown RBP eCLIP16.16■□□□□ 0.18
GAPDHP41-201ENST00000613707 PIP4P2Q8N4L2 257 aa16.16■□□□□ 0.18
GAPDHP41-201ENST00000613707 PRKAR2AP13861 404 aaKnown RBP16.08■□□□□ 0.16
GAPDHP41-201ENST00000613707 CHADLQ6NUI6 762 aa16.06■□□□□ 0.16
GAPDHP41-201ENST00000613707 POTEHQ6S545 545 aa16.03■□□□□ 0.16
GAPDHP41-201ENST00000613707 MIER1Q8N108 512 aa16.01■□□□□ 0.15
GAPDHP41-201ENST00000613707 CREBZFQ9NS37 354 aa16.01■□□□□ 0.15
GAPDHP41-201ENST00000613707 PLCD3Q8N3E9 789 aa16■□□□□ 0.15
GAPDHP41-201ENST00000613707 PLEKHG5O94827 1062 aa15.98■□□□□ 0.15
GAPDHP41-201ENST00000613707 VASPP50552 380 aaPredicted RBP15.98■□□□□ 0.15
GAPDHP41-201ENST00000613707 FARP1Q9Y4F1 1045 aaPredicted RBP15.88■□□□□ 0.13
GAPDHP41-201ENST00000613707 ZBTB47Q9UFB7 747 aaPredicted RBP15.81■□□□□ 0.12
GAPDHP41-201ENST00000613707 MNX1P50219 401 aaPredicted RBP15.8■□□□□ 0.12
GAPDHP41-201ENST00000613707 NPM1P06748 294 aaKnown RBP eCLIP15.79■□□□□ 0.12
GAPDHP41-201ENST00000613707 KLHL34Q8N239 644 aa15.78■□□□□ 0.12
GAPDHP41-201ENST00000613707 IFNLR1Q8IU57 520 aaPredicted RBP15.72■□□□□ 0.11
GAPDHP41-201ENST00000613707 HAX1O00165 279 aa15.71■□□□□ 0.11
GAPDHP41-201ENST00000613707 C19orf67A6NJJ6 358 aa15.63■□□□□ 0.09
GAPDHP41-201ENST00000613707 CD44P16070 742 aaKnown RBP15.62■□□□□ 0.09
GAPDHP41-201ENST00000613707 SPOCK2Q92563 424 aa15.59■□□□□ 0.09
GAPDHP41-201ENST00000613707 PAK3O75914 559 aaPredicted RBP15.58■□□□□ 0.08
GAPDHP41-201ENST00000613707 NUBP1P53384 320 aa15.57■□□□□ 0.08
GAPDHP41-201ENST00000613707 RASEFQ8IZ41 740 aa15.55■□□□□ 0.08
GAPDHP41-201ENST00000613707 TSPYL2Q9H2G4 693 aaPredicted RBP15.53■□□□□ 0.08
GAPDHP41-201ENST00000613707 ZRANB1Q9UGI0 708 aa15.52■□□□□ 0.08
GAPDHP41-201ENST00000613707 EVX2Q03828 476 aa15.51■□□□□ 0.07
GAPDHP41-201ENST00000613707 FAM212AQ96EL1 285 aa15.5■□□□□ 0.07
GAPDHP41-201ENST00000613707 DCAF8Q5TAQ9 597 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms