Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
MYCNP04198 BTN2A3P-201ENST00000377662 1836 ntBASIC11.04□□□□□ -0.64
MYCNP04198 APOBEC3G-201ENST00000407997 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MYCNP04198 ACSL6-203ENST00000379240 2548 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
MYCNP04198 TARID-209ENST00000630119 4294 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MYCNP04198 ZSCAN31-209ENST00000439158 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MYCNP04198 ZNF285-201ENST00000544719 2793 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
MYCNP04198 NUSAP1-201ENST00000260359 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MYCNP04198 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MYCNP04198 LINC00886-201ENST00000472943 3306 ntTSL 2 BASIC11.04□□□□□ -0.64
MYCNP04198 TSPAN18-201ENST00000340160 4229 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
MYCNP04198 STEAP3-203ENST00000393110 4262 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MYCNP04198 USP2-AS1-201ENST00000498979 2486 ntTSL 3 BASIC11.03□□□□□ -0.64
MYCNP04198 POTEKP-201ENST00000397487 2688 ntBASIC11.03□□□□□ -0.64
MYCNP04198 LINC00870-202ENST00000473713 2693 ntTSL 2 BASIC11.03□□□□□ -0.64
MYCNP04198 KPNA2P1-201ENST00000458289 1591 ntBASIC11.03□□□□□ -0.64
MYCNP04198 OR51S1-201ENST00000322101 1750 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
MYCNP04198 RCAN1-210ENST00000487990 2520 ntTSL 2 BASIC11.03□□□□□ -0.64
MYCNP04198 LINC01949-201ENST00000445770 2721 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MYCNP04198 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MYCNP04198 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MYCNP04198 AC004972.1-201ENST00000623934 2209 ntBASIC11.03□□□□□ -0.64
MYCNP04198 CSHL1-202ENST00000309894 669 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
MYCNP04198 SNORD113-7-201ENST00000363762 77 ntBASIC11.03□□□□□ -0.64
MYCNP04198 RNU6-770P-201ENST00000363929 105 ntBASIC11.03□□□□□ -0.64
MYCNP04198 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
MYCNP04198 RNU6-657P-201ENST00000383904 107 ntBASIC11.03□□□□□ -0.64
MYCNP04198 TANK-203ENST00000402568 878 ntTSL 5 BASIC11.03□□□□□ -0.64
MYCNP04198 AL133406.1-201ENST00000404904 747 ntBASIC11.03□□□□□ -0.64
MYCNP04198 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC11.03□□□□□ -0.64
MYCNP04198 AC105399.1-202ENST00000447303 205 ntBASIC11.03□□□□□ -0.64
MYCNP04198 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC11.03□□□□□ -0.64
MYCNP04198 RPL35AP28-201ENST00000459730 331 ntBASIC11.03□□□□□ -0.64
MYCNP04198 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC11.03□□□□□ -0.64
MYCNP04198 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC11.03□□□□□ -0.64
MYCNP04198 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC11.03□□□□□ -0.64
MYCNP04198 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC11.03□□□□□ -0.64
MYCNP04198 AC012400.1-201ENST00000518452 381 ntBASIC11.03□□□□□ -0.64
MYCNP04198 IGKV3-34-201ENST00000521692 293 ntBASIC11.03□□□□□ -0.64
MYCNP04198 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MYCNP04198 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC11.03□□□□□ -0.64
MYCNP04198 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC11.03□□□□□ -0.64
MYCNP04198 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC11.03□□□□□ -0.64
MYCNP04198 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
MYCNP04198 AP005119.1-201ENST00000580956 292 ntBASIC11.03□□□□□ -0.64
MYCNP04198 AC011447.2-201ENST00000592921 283 ntBASIC11.03□□□□□ -0.64
MYCNP04198 RN7SL462P-201ENST00000610302 261 ntBASIC11.03□□□□□ -0.64
MYCNP04198 RN7SL422P-201ENST00000612850 261 ntBASIC11.03□□□□□ -0.64
MYCNP04198 RN7SL343P-201ENST00000620904 261 ntBASIC11.03□□□□□ -0.64
MYCNP04198 RN7SL640P-201ENST00000622591 261 ntBASIC11.03□□□□□ -0.64
MYCNP04198 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC11.03□□□□□ -0.64
MYCNP04198 MSC-AS1-201ENST00000457356 4220 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MYCNP04198 ZP4-202ENST00000611898 2474 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
MYCNP04198 PGM1-201ENST00000371083 2657 ntTSL 2 BASIC11.03□□□□□ -0.64
MYCNP04198 AC005077.4-201ENST00000421546 3495 ntBASIC11.03□□□□□ -0.64
MYCNP04198 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
MYCNP04198 AC010207.1-201ENST00000568384 1946 ntBASIC11.03□□□□□ -0.64
MYCNP04198 HCAR1-201ENST00000432564 4768 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
MYCNP04198 CFAP44-201ENST00000295868 3377 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
MYCNP04198 ZNF83-211ENST00000597597 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MYCNP04198 UPF3B-201ENST00000276201 2378 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MYCNP04198 ADH4-201ENST00000265512 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MYCNP04198 GIGYF2-203ENST00000409451 5937 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MYCNP04198 MDH1B-205ENST00000454776 1795 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
MYCNP04198 SCMH1-207ENST00000372597 3252 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MYCNP04198 DHX35-203ENST00000373325 3287 ntTSL 5 BASIC11.03□□□□□ -0.64
MYCNP04198 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
MYCNP04198 CCDC13-AS1-201ENST00000418161 2049 ntTSL 2 BASIC11.02□□□□□ -0.64
MYCNP04198 GALK2-202ENST00000396509 1834 ntTSL 2 BASIC11.02□□□□□ -0.64
MYCNP04198 CARMN-201ENST00000505254 3950 ntTSL 5 BASIC11.02□□□□□ -0.64
MYCNP04198 AC138869.3-201ENST00000563960 2486 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
MYCNP04198 PTPRA-203ENST00000356147 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MYCNP04198 ZNF615-214ENST00000618049 2284 ntTSL 5 BASIC11.02□□□□□ -0.64
MYCNP04198 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
MYCNP04198 AL592158.1-201ENST00000632210 4477 ntBASIC11.02□□□□□ -0.64
MYCNP04198 STXBP5L-204ENST00000471454 3813 ntAPPRIS ALT1 TSL 2 BASIC11.02□□□□□ -0.64
MYCNP04198 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MYCNP04198 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
MYCNP04198 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MYCNP04198 FBXL7-201ENST00000329673 3960 ntTSL 2 BASIC11.02□□□□□ -0.65
MYCNP04198 SMG7-215ENST00000515829 5629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
MYCNP04198 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC11.02□□□□□ -0.65
MYCNP04198 KRTAP20-3-201ENST00000382826 273 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
MYCNP04198 Y_RNA.496-201ENST00000384444 101 ntBASIC11.02□□□□□ -0.65
MYCNP04198 FDPSP5-201ENST00000399474 1057 ntBASIC11.02□□□□□ -0.65
MYCNP04198 RAET1M-201ENST00000405282 596 ntBASIC11.02□□□□□ -0.65
MYCNP04198 ING4-203ENST00000412586 741 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MYCNP04198 AC103563.8-201ENST00000415716 318 ntBASIC11.02□□□□□ -0.65
MYCNP04198 EIF4EP1-201ENST00000422311 642 ntBASIC11.02□□□□□ -0.65
MYCNP04198 ING4-204ENST00000423703 602 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MYCNP04198 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MYCNP04198 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MYCNP04198 AF274573.1-201ENST00000430535 494 ntBASIC11.02□□□□□ -0.65
MYCNP04198 GSG1-204ENST00000432710 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
MYCNP04198 LINC00112-201ENST00000432830 522 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MYCNP04198 ING4-206ENST00000444704 678 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MYCNP04198 AL590664.1-201ENST00000448065 339 ntBASIC11.02□□□□□ -0.65
MYCNP04198 GRPEL2P3-201ENST00000448626 640 ntBASIC11.02□□□□□ -0.65
MYCNP04198 PRDX2P1-201ENST00000450181 589 ntBASIC11.02□□□□□ -0.65
MYCNP04198 AL935212.3-201ENST00000450729 284 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms