Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC093027.1-201ENST00000546698 429 ntBASIC8.91□□□□□ -0.98
RNF40O75150 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC8.91□□□□□ -0.98
RNF40O75150 AC004825.1-201ENST00000555068 586 ntBASIC8.91□□□□□ -0.98
RNF40O75150 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC8.91□□□□□ -0.98
RNF40O75150 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC8.91□□□□□ -0.98
RNF40O75150 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC8.91□□□□□ -0.98
RNF40O75150 CYP4A44P-201ENST00000569984 154 ntBASIC8.91□□□□□ -0.98
RNF40O75150 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC8.91□□□□□ -0.98
RNF40O75150 COX6CP4-201ENST00000605798 228 ntBASIC8.91□□□□□ -0.98
RNF40O75150 AC087742.2-201ENST00000616113 740 ntBASIC8.91□□□□□ -0.98
RNF40O75150 OR8G7P-201ENST00000616658 848 ntBASIC8.91□□□□□ -0.98
RNF40O75150 AL031658.2-201ENST00000616850 651 ntBASIC8.91□□□□□ -0.98
RNF40O75150 YWHAEP7-203ENST00000622054 312 ntBASIC8.91□□□□□ -0.98
RNF40O75150 AC073348.1-201ENST00000623002 331 ntBASIC8.91□□□□□ -0.98
RNF40O75150 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC8.91□□□□□ -0.98
RNF40O75150 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
RNF40O75150 SP110-215ENST00000540870 2032 ntTSL 2 BASIC8.91□□□□□ -0.98
RNF40O75150 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
RNF40O75150 AL512504.2-201ENST00000445455 1909 ntBASIC8.91□□□□□ -0.98
RNF40O75150 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC8.91□□□□□ -0.98
RNF40O75150 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC8.91□□□□□ -0.98
RNF40O75150 XRCC6P3-201ENST00000422187 1621 ntBASIC8.91□□□□□ -0.98
RNF40O75150 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RNF40O75150 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RNF40O75150 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RNF40O75150 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RNF40O75150 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RNF40O75150 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC8.9□□□□□ -0.98
RNF40O75150 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RNF40O75150 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RNF40O75150 EEF1A1P28-201ENST00000450915 1403 ntBASIC8.9□□□□□ -0.98
RNF40O75150 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC8.9□□□□□ -0.98
RNF40O75150 CASC19-206ENST00000641028 1430 ntBASIC8.9□□□□□ -0.98
RNF40O75150 SEPT4-216ENST00000580844 1396 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
RNF40O75150 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC8.9□□□□□ -0.98
RNF40O75150 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RNF40O75150 AL513523.1-201ENST00000417868 1309 ntBASIC8.9□□□□□ -0.98
RNF40O75150 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
RNF40O75150 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RNF40O75150 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
RNF40O75150 Y_RNA.216-201ENST00000364205 93 ntBASIC8.9□□□□□ -0.98
RNF40O75150 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
RNF40O75150 MT-TS1-201ENST00000387416 69 ntBASIC8.9□□□□□ -0.98
RNF40O75150 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC8.9□□□□□ -0.98
RNF40O75150 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC8.9□□□□□ -0.98
RNF40O75150 VN1R20P-201ENST00000425215 966 ntBASIC8.9□□□□□ -0.98
RNF40O75150 AC104843.2-201ENST00000427666 297 ntBASIC8.9□□□□□ -0.98
RNF40O75150 AC244034.1-201ENST00000428027 792 ntBASIC8.9□□□□□ -0.98
RNF40O75150 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC8.9□□□□□ -0.98
RNF40O75150 Z74696.1-201ENST00000428208 1123 ntBASIC8.9□□□□□ -0.98
RNF40O75150 LINC01425-202ENST00000430060 760 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RNF40O75150 ETF1P3-201ENST00000430422 1160 ntBASIC8.9□□□□□ -0.98
RNF40O75150 CLUHP5-201ENST00000438421 774 ntBASIC8.9□□□□□ -0.98
RNF40O75150 MTND3P2-201ENST00000438452 342 ntBASIC8.9□□□□□ -0.98
RNF40O75150 AL512286.1-201ENST00000439244 400 ntBASIC8.9□□□□□ -0.98
RNF40O75150 LYZL4-202ENST00000441172 838 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
RNF40O75150 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC8.9□□□□□ -0.98
RNF40O75150 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC8.9□□□□□ -0.98
RNF40O75150 RBMY3AP-201ENST00000449381 1145 ntBASIC8.9□□□□□ -0.98
RNF40O75150 FAR2P1-206ENST00000449736 709 ntBASIC8.9□□□□□ -0.98
RNF40O75150 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC8.9□□□□□ -0.98
RNF40O75150 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC8.9□□□□□ -0.98
RNF40O75150 AC093166.4-201ENST00000457867 318 ntBASIC8.9□□□□□ -0.98
RNF40O75150 RN7SL608P-201ENST00000492377 279 ntBASIC8.9□□□□□ -0.98
RNF40O75150 AC011352.3-201ENST00000505162 593 ntBASIC8.9□□□□□ -0.98
RNF40O75150 AC026427.2-201ENST00000506228 536 ntBASIC8.9□□□□□ -0.98
RNF40O75150 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
RNF40O75150 AF235103.2-201ENST00000525753 346 ntBASIC8.9□□□□□ -0.98
RNF40O75150 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC8.9□□□□□ -0.98
RNF40O75150 ULK4P2-202ENST00000564187 492 ntBASIC8.9□□□□□ -0.98
RNF40O75150 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC8.9□□□□□ -0.98
RNF40O75150 AC138761.2-201ENST00000583878 343 ntBASIC8.9□□□□□ -0.98
RNF40O75150 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC8.9□□□□□ -0.98
RNF40O75150 RNF219-AS1-213ENST00000607860 577 ntTSL 4 BASIC8.9□□□□□ -0.98
RNF40O75150 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC8.9□□□□□ -0.98
RNF40O75150 AC018926.2-201ENST00000611214 498 ntBASIC8.9□□□□□ -0.98
RNF40O75150 AL592295.2-201ENST00000612578 206 ntBASIC8.9□□□□□ -0.98
RNF40O75150 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RNF40O75150 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC8.9□□□□□ -0.98
RNF40O75150 MAGOHB-211ENST00000625272 319 ntTSL 3 BASIC8.9□□□□□ -0.98
RNF40O75150 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC8.9□□□□□ -0.98
RNF40O75150 MAPK10-377ENST00000642006 2752 ntBASIC8.9□□□□□ -0.98
RNF40O75150 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RNF40O75150 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
RNF40O75150 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RNF40O75150 TCF4-241ENST00000568740 2628 ntTSL 5 BASIC8.9□□□□□ -0.98
RNF40O75150 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
RNF40O75150 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC8.9□□□□□ -0.99
RNF40O75150 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
RNF40O75150 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.9□□□□□ -0.99
RNF40O75150 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.9□□□□□ -0.99
RNF40O75150 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
RNF40O75150 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
RNF40O75150 AL669831.5-218ENST00000591702 1873 ntBASIC8.89□□□□□ -0.99
RNF40O75150 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RNF40O75150 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
RNF40O75150 LRRC37A17P-201ENST00000570311 4693 ntBASIC8.89□□□□□ -0.99
RNF40O75150 UTP15-202ENST00000508491 1828 ntTSL 2 BASIC8.89□□□□□ -0.99
RNF40O75150 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RNF40O75150 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms