Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
TNFRSF11AQ9Y6Q6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 NBPF21P-201ENST00000425093 1451 ntBASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TNFRSF11AQ9Y6Q6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC24.31■■□□□ 1.48
TNFRSF11AQ9Y6Q6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TNFRSF11AQ9Y6Q6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TNFRSF11AQ9Y6Q6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC24.3■■□□□ 1.48
TNFRSF11AQ9Y6Q6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TNFRSF11AQ9Y6Q6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TNFRSF11AQ9Y6Q6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC24.3■■□□□ 1.48
TNFRSF11AQ9Y6Q6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TNFRSF11AQ9Y6Q6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TNFRSF11AQ9Y6Q6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.3■■□□□ 1.48
TNFRSF11AQ9Y6Q6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
TNFRSF11AQ9Y6Q6 LBX2-AS1-202ENST00000603175 2083 ntBASIC24.3■■□□□ 1.48
TNFRSF11AQ9Y6Q6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC24.3■■□□□ 1.48
TNFRSF11AQ9Y6Q6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
TNFRSF11AQ9Y6Q6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC24.29■■□□□ 1.48
TNFRSF11AQ9Y6Q6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC24.29■■□□□ 1.48
TNFRSF11AQ9Y6Q6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TNFRSF11AQ9Y6Q6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TNFRSF11AQ9Y6Q6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TNFRSF11AQ9Y6Q6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TNFRSF11AQ9Y6Q6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC24.29■■□□□ 1.48
TNFRSF11AQ9Y6Q6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC24.29■■□□□ 1.48
TNFRSF11AQ9Y6Q6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC24.29■■□□□ 1.48
TNFRSF11AQ9Y6Q6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TNFRSF11AQ9Y6Q6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC24.29■■□□□ 1.48
TNFRSF11AQ9Y6Q6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
TNFRSF11AQ9Y6Q6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
TNFRSF11AQ9Y6Q6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
TNFRSF11AQ9Y6Q6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TNFRSF11AQ9Y6Q6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC24.28■■□□□ 1.48
TNFRSF11AQ9Y6Q6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
TNFRSF11AQ9Y6Q6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TNFRSF11AQ9Y6Q6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
TNFRSF11AQ9Y6Q6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TNFRSF11AQ9Y6Q6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TNFRSF11AQ9Y6Q6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC24.28■■□□□ 1.48
TNFRSF11AQ9Y6Q6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC24.28■■□□□ 1.48
TNFRSF11AQ9Y6Q6 MAX-217ENST00000557277 728 ntTSL 3 BASIC24.28■■□□□ 1.48
TNFRSF11AQ9Y6Q6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TNFRSF11AQ9Y6Q6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TNFRSF11AQ9Y6Q6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TNFRSF11AQ9Y6Q6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC24.28■■□□□ 1.48
TNFRSF11AQ9Y6Q6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TNFRSF11AQ9Y6Q6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
TNFRSF11AQ9Y6Q6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
TNFRSF11AQ9Y6Q6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TNFRSF11AQ9Y6Q6 AC125437.2-201ENST00000625180 2167 ntBASIC24.27■■□□□ 1.48
TNFRSF11AQ9Y6Q6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TNFRSF11AQ9Y6Q6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
TNFRSF11AQ9Y6Q6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
TNFRSF11AQ9Y6Q6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
TNFRSF11AQ9Y6Q6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC24.27■■□□□ 1.48
TNFRSF11AQ9Y6Q6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TNFRSF11AQ9Y6Q6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TNFRSF11AQ9Y6Q6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC24.27■■□□□ 1.48
TNFRSF11AQ9Y6Q6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
TNFRSF11AQ9Y6Q6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TNFRSF11AQ9Y6Q6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
TNFRSF11AQ9Y6Q6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms