Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 KRT16P2-201ENST00000414673 1423 ntBASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4B1Q9Y6B7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 Z82202.1-201ENST00000623446 1880 ntBASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 SLC7A5P2-201ENST00000553010 536 ntBASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 AC011767.1-201ENST00000617410 1153 ntBASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.94■□□□□ 0.62
AP4B1Q9Y6B7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 AL049812.1-201ENST00000432563 2267 ntBASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 AC080038.1-201ENST00000611274 1154 ntBASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4B1Q9Y6B7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.92■□□□□ 0.62
AP4B1Q9Y6B7 MFSD11-216ENST00000590393 1141 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms