Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 PRKY-204ENST00000533551 1019 ntBASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PCDHGA3Q9Y5H0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 AC011484.1-201ENST00000377652 1995 ntBASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA3Q9Y5H0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 AC138932.1-201ENST00000534164 6830 ntBASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 AC023632.3-201ENST00000521633 145 ntBASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 AC113410.3-201ENST00000623366 203 ntBASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGA3Q9Y5H0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 AL121829.2-201ENST00000620908 328 ntBASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA3Q9Y5H0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA3Q9Y5H0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA3Q9Y5H0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms