Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH3Q9UM47 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH3Q9UM47 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH3Q9UM47 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH3Q9UM47 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.27■□□□□ 0.03
NOTCH3Q9UM47 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NOTCH3Q9UM47 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NOTCH3Q9UM47 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
NOTCH3Q9UM47 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.27■□□□□ 0.03
NOTCH3Q9UM47 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NOTCH3Q9UM47 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH3Q9UM47 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NOTCH3Q9UM47 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.27■□□□□ 0.03
NOTCH3Q9UM47 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 FAM197Y1-201ENST00000421178 764 ntBASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 C2orf69P3-201ENST00000565542 1120 ntBASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NOTCH3Q9UM47 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 AC007375.3-201ENST00000600936 2314 ntBASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 PTBP1P-201ENST00000554374 1601 ntBASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 AL031963.3-201ENST00000606441 850 ntBASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 AL121829.2-201ENST00000620908 328 ntBASIC15.25■□□□□ 0.03
NOTCH3Q9UM47 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH3Q9UM47 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms