Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EBF1Q9UH73 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EBF1Q9UH73 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
EBF1Q9UH73 UNC93B2-201ENST00000285383 730 ntBASIC20.19■□□□□ 0.82
EBF1Q9UH73 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
EBF1Q9UH73 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EBF1Q9UH73 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
EBF1Q9UH73 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.19■□□□□ 0.82
EBF1Q9UH73 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.19■□□□□ 0.82
EBF1Q9UH73 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.19■□□□□ 0.82
EBF1Q9UH73 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EBF1Q9UH73 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.19■□□□□ 0.82
EBF1Q9UH73 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.19■□□□□ 0.82
EBF1Q9UH73 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EBF1Q9UH73 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EBF1Q9UH73 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
EBF1Q9UH73 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EBF1Q9UH73 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
EBF1Q9UH73 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EBF1Q9UH73 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EBF1Q9UH73 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EBF1Q9UH73 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.18■□□□□ 0.82
EBF1Q9UH73 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EBF1Q9UH73 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EBF1Q9UH73 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
EBF1Q9UH73 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.18■□□□□ 0.82
EBF1Q9UH73 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
EBF1Q9UH73 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
EBF1Q9UH73 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EBF1Q9UH73 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EBF1Q9UH73 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.18■□□□□ 0.82
EBF1Q9UH73 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
EBF1Q9UH73 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.18■□□□□ 0.82
EBF1Q9UH73 MIR6786-201ENST00000616843 113 ntBASIC20.18■□□□□ 0.82
EBF1Q9UH73 AC005363.2-201ENST00000618631 242 ntBASIC20.18■□□□□ 0.82
EBF1Q9UH73 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EBF1Q9UH73 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EBF1Q9UH73 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
EBF1Q9UH73 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EBF1Q9UH73 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EBF1Q9UH73 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
EBF1Q9UH73 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EBF1Q9UH73 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.17■□□□□ 0.82
EBF1Q9UH73 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
EBF1Q9UH73 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EBF1Q9UH73 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EBF1Q9UH73 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.17■□□□□ 0.82
EBF1Q9UH73 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EBF1Q9UH73 AL049597.2-201ENST00000565575 961 ntBASIC20.17■□□□□ 0.82
EBF1Q9UH73 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.17■□□□□ 0.82
EBF1Q9UH73 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.17■□□□□ 0.82
EBF1Q9UH73 REXO1L10P-201ENST00000615707 1290 ntBASIC20.17■□□□□ 0.82
EBF1Q9UH73 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.17■□□□□ 0.82
EBF1Q9UH73 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.17■□□□□ 0.82
EBF1Q9UH73 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EBF1Q9UH73 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EBF1Q9UH73 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
EBF1Q9UH73 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.17■□□□□ 0.82
EBF1Q9UH73 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
EBF1Q9UH73 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EBF1Q9UH73 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EBF1Q9UH73 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.16■□□□□ 0.82
EBF1Q9UH73 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EBF1Q9UH73 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EBF1Q9UH73 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EBF1Q9UH73 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EBF1Q9UH73 ARMC10P1-201ENST00000313754 855 ntBASIC20.16■□□□□ 0.82
EBF1Q9UH73 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EBF1Q9UH73 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.16■□□□□ 0.82
EBF1Q9UH73 AP002982.1-201ENST00000492365 877 ntBASIC20.16■□□□□ 0.82
EBF1Q9UH73 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EBF1Q9UH73 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.16■□□□□ 0.82
EBF1Q9UH73 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.16■□□□□ 0.82
EBF1Q9UH73 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
EBF1Q9UH73 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
EBF1Q9UH73 AC079598.2-202ENST00000546624 1451 ntBASIC20.16■□□□□ 0.82
EBF1Q9UH73 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EBF1Q9UH73 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EBF1Q9UH73 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EBF1Q9UH73 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EBF1Q9UH73 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EBF1Q9UH73 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
EBF1Q9UH73 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EBF1Q9UH73 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EBF1Q9UH73 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.15■□□□□ 0.82
EBF1Q9UH73 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EBF1Q9UH73 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.15■□□□□ 0.82
EBF1Q9UH73 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.15■□□□□ 0.82
EBF1Q9UH73 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.15■□□□□ 0.82
EBF1Q9UH73 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.15■□□□□ 0.82
EBF1Q9UH73 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.15■□□□□ 0.82
EBF1Q9UH73 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
EBF1Q9UH73 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
EBF1Q9UH73 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EBF1Q9UH73 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.15■□□□□ 0.82
EBF1Q9UH73 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EBF1Q9UH73 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
EBF1Q9UH73 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
EBF1Q9UH73 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
EBF1Q9UH73 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms