Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NIPSNAP3AQ9UFN0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.88■□□□□ 0.61
NIPSNAP3AQ9UFN0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.88■□□□□ 0.61
NIPSNAP3AQ9UFN0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.88■□□□□ 0.61
NIPSNAP3AQ9UFN0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPSNAP3AQ9UFN0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NIPSNAP3AQ9UFN0 CYP21A1P-202ENST00000354927 1481 ntBASIC18.88■□□□□ 0.61
NIPSNAP3AQ9UFN0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NIPSNAP3AQ9UFN0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.88■□□□□ 0.61
NIPSNAP3AQ9UFN0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPSNAP3AQ9UFN0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPSNAP3AQ9UFN0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NIPSNAP3AQ9UFN0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPSNAP3AQ9UFN0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPSNAP3AQ9UFN0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NIPSNAP3AQ9UFN0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.87■□□□□ 0.61
NIPSNAP3AQ9UFN0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NIPSNAP3AQ9UFN0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NIPSNAP3AQ9UFN0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NIPSNAP3AQ9UFN0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NIPSNAP3AQ9UFN0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NIPSNAP3AQ9UFN0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NIPSNAP3AQ9UFN0 TNXA-203ENST00000507684 2038 ntBASIC18.87■□□□□ 0.61
NIPSNAP3AQ9UFN0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NIPSNAP3AQ9UFN0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.87■□□□□ 0.61
NIPSNAP3AQ9UFN0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NIPSNAP3AQ9UFN0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.87■□□□□ 0.61
NIPSNAP3AQ9UFN0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NIPSNAP3AQ9UFN0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.87■□□□□ 0.61
NIPSNAP3AQ9UFN0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 AL591742.1-201ENST00000604433 565 ntBASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.86■□□□□ 0.61
NIPSNAP3AQ9UFN0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 AC009237.14-201ENST00000609975 1594 ntBASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NIPSNAP3AQ9UFN0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 MIR638-201ENST00000385237 100 ntBASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 TERF1P5-201ENST00000477545 1207 ntBASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms