Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NKX1-2Q9UD57 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.83■□□□□ 0.61
NKX1-2Q9UD57 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
NKX1-2Q9UD57 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NKX1-2Q9UD57 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NKX1-2Q9UD57 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
NKX1-2Q9UD57 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NKX1-2Q9UD57 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.83■□□□□ 0.6
NKX1-2Q9UD57 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NKX1-2Q9UD57 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.83■□□□□ 0.6
NKX1-2Q9UD57 BX664725.1-201ENST00000438252 379 ntBASIC18.83■□□□□ 0.6
NKX1-2Q9UD57 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.83■□□□□ 0.6
NKX1-2Q9UD57 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
NKX1-2Q9UD57 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX1-2Q9UD57 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NKX1-2Q9UD57 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX1-2Q9UD57 KRT8P33-201ENST00000508125 1423 ntBASIC18.83■□□□□ 0.6
NKX1-2Q9UD57 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX1-2Q9UD57 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX1-2Q9UD57 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NKX1-2Q9UD57 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NKX1-2Q9UD57 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX1-2Q9UD57 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX1-2Q9UD57 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX1-2Q9UD57 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.82■□□□□ 0.6
NKX1-2Q9UD57 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX1-2Q9UD57 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.82■□□□□ 0.6
NKX1-2Q9UD57 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
NKX1-2Q9UD57 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NKX1-2Q9UD57 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
NKX1-2Q9UD57 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NKX1-2Q9UD57 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NKX1-2Q9UD57 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.82■□□□□ 0.6
NKX1-2Q9UD57 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NKX1-2Q9UD57 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 AL031598.1-201ENST00000561511 1773 ntBASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX1-2Q9UD57 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 AC009053.2-201ENST00000563701 2365 ntBASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 AL031848.2-201ENST00000607670 837 ntBASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 SYT6-210ENST00000641643 1587 ntBASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NKX1-2Q9UD57 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NKX1-2Q9UD57 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NKX1-2Q9UD57 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NKX1-2Q9UD57 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX1-2Q9UD57 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NKX1-2Q9UD57 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NKX1-2Q9UD57 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX1-2Q9UD57 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NKX1-2Q9UD57 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.79■□□□□ 0.6
NKX1-2Q9UD57 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX1-2Q9UD57 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NKX1-2Q9UD57 AL033527.3-201ENST00000566366 1196 ntBASIC18.79■□□□□ 0.6
NKX1-2Q9UD57 AC010997.5-201ENST00000609182 354 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms