Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 AC009299.2-201ENST00000482477 511 ntBASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
COMMD3Q9UBI1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
COMMD3Q9UBI1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
COMMD3Q9UBI1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.39■□□□□ 0.38
COMMD3Q9UBI1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
COMMD3Q9UBI1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
COMMD3Q9UBI1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COMMD3Q9UBI1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 AC245052.3-201ENST00000450182 901 ntBASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COMMD3Q9UBI1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 AC008175.2-201ENST00000612840 297 ntBASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 KRT8P36-201ENST00000489121 1440 ntBASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
COMMD3Q9UBI1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms