Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.88■□□□□ 0.77
CPSF2Q9P2I0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 FZD10-202ENST00000539839 3282 ntBASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 BX119927.1-201ENST00000636596 1552 ntBASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 NTF6G-201ENST00000591094 616 ntBASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF2Q9P2I0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 AC106820.2-201ENST00000563775 3264 ntBASIC19.86■□□□□ 0.77
CPSF2Q9P2I0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.85■□□□□ 0.77
CPSF2Q9P2I0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF2Q9P2I0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.85■□□□□ 0.77
CPSF2Q9P2I0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF2Q9P2I0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF2Q9P2I0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF2Q9P2I0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.85■□□□□ 0.77
CPSF2Q9P2I0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.85■□□□□ 0.77
CPSF2Q9P2I0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF2Q9P2I0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CPSF2Q9P2I0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CPSF2Q9P2I0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.85■□□□□ 0.77
CPSF2Q9P2I0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.85■□□□□ 0.77
CPSF2Q9P2I0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CPSF2Q9P2I0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF2Q9P2I0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms