Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 AC007322.1-201ENST00000426983 750 ntBASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 AL589743.5-201ENST00000616611 1050 ntBASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THUMPD1Q9NXG2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 CYP2T1P-201ENST00000432607 1285 ntBASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 AC093484.2-201ENST00000580996 2166 ntBASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
THUMPD1Q9NXG2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.58■□□□□ 0.57
THUMPD1Q9NXG2 TREX1-205ENST00000625293 1783 ntBASIC18.58■□□□□ 0.57
THUMPD1Q9NXG2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
THUMPD1Q9NXG2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.58■□□□□ 0.57
THUMPD1Q9NXG2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
THUMPD1Q9NXG2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
THUMPD1Q9NXG2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
THUMPD1Q9NXG2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
THUMPD1Q9NXG2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.58■□□□□ 0.56
THUMPD1Q9NXG2 AC023632.3-201ENST00000521633 145 ntBASIC18.58■□□□□ 0.56
THUMPD1Q9NXG2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.58■□□□□ 0.56
THUMPD1Q9NXG2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.58■□□□□ 0.56
THUMPD1Q9NXG2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
THUMPD1Q9NXG2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
THUMPD1Q9NXG2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.58■□□□□ 0.56
THUMPD1Q9NXG2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
THUMPD1Q9NXG2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
THUMPD1Q9NXG2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
THUMPD1Q9NXG2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
THUMPD1Q9NXG2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.58■□□□□ 0.56
THUMPD1Q9NXG2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 AIRN-201ENST00000601203 4374 ntBASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 AL512625.2-201ENST00000417533 625 ntBASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THUMPD1Q9NXG2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms