Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AC008687.6-201ENST00000596318 630 ntBASIC16.9■□□□□ 0.3
GCM1Q9NP62 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GCM1Q9NP62 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GCM1Q9NP62 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.9■□□□□ 0.3
GCM1Q9NP62 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GCM1Q9NP62 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GCM1Q9NP62 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GCM1Q9NP62 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.9■□□□□ 0.3
GCM1Q9NP62 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.9■□□□□ 0.3
GCM1Q9NP62 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GCM1Q9NP62 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.9■□□□□ 0.3
GCM1Q9NP62 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.9■□□□□ 0.3
GCM1Q9NP62 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GCM1Q9NP62 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
GCM1Q9NP62 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
GCM1Q9NP62 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GCM1Q9NP62 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GCM1Q9NP62 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GCM1Q9NP62 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GCM1Q9NP62 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.89■□□□□ 0.29
GCM1Q9NP62 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.89■□□□□ 0.29
GCM1Q9NP62 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.89■□□□□ 0.29
GCM1Q9NP62 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.89■□□□□ 0.29
GCM1Q9NP62 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GCM1Q9NP62 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.89■□□□□ 0.29
GCM1Q9NP62 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GCM1Q9NP62 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GCM1Q9NP62 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GCM1Q9NP62 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GCM1Q9NP62 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
GCM1Q9NP62 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GCM1Q9NP62 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GCM1Q9NP62 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GCM1Q9NP62 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GCM1Q9NP62 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GCM1Q9NP62 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
GCM1Q9NP62 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GCM1Q9NP62 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.89■□□□□ 0.29
GCM1Q9NP62 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.89■□□□□ 0.29
GCM1Q9NP62 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GCM1Q9NP62 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GCM1Q9NP62 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GCM1Q9NP62 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.88■□□□□ 0.29
GCM1Q9NP62 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GCM1Q9NP62 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GCM1Q9NP62 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GCM1Q9NP62 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GCM1Q9NP62 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GCM1Q9NP62 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
GCM1Q9NP62 ABHD17AP1-201ENST00000358206 933 ntBASIC16.88■□□□□ 0.29
GCM1Q9NP62 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GCM1Q9NP62 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.88■□□□□ 0.29
GCM1Q9NP62 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GCM1Q9NP62 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.88■□□□□ 0.29
GCM1Q9NP62 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.88■□□□□ 0.29
GCM1Q9NP62 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GCM1Q9NP62 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.88■□□□□ 0.29
GCM1Q9NP62 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.88■□□□□ 0.29
GCM1Q9NP62 AC120498.8-201ENST00000614275 531 ntBASIC16.88■□□□□ 0.29
GCM1Q9NP62 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.88■□□□□ 0.29
GCM1Q9NP62 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GCM1Q9NP62 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GCM1Q9NP62 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.88■□□□□ 0.29
GCM1Q9NP62 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.88■□□□□ 0.29
GCM1Q9NP62 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GCM1Q9NP62 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
GCM1Q9NP62 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GCM1Q9NP62 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GCM1Q9NP62 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GCM1Q9NP62 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.87■□□□□ 0.29
GCM1Q9NP62 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.87■□□□□ 0.29
GCM1Q9NP62 AL162377.1-201ENST00000618844 1793 ntBASIC16.87■□□□□ 0.29
GCM1Q9NP62 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.87■□□□□ 0.29
GCM1Q9NP62 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GCM1Q9NP62 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GCM1Q9NP62 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GCM1Q9NP62 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GCM1Q9NP62 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GCM1Q9NP62 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GCM1Q9NP62 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.87■□□□□ 0.29
GCM1Q9NP62 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GCM1Q9NP62 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.87■□□□□ 0.29
GCM1Q9NP62 POM121L13P-201ENST00000422362 380 ntBASIC16.87■□□□□ 0.29
GCM1Q9NP62 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.87■□□□□ 0.29
GCM1Q9NP62 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GCM1Q9NP62 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GCM1Q9NP62 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.87■□□□□ 0.29
GCM1Q9NP62 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GCM1Q9NP62 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GCM1Q9NP62 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GCM1Q9NP62 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
GCM1Q9NP62 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GCM1Q9NP62 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GCM1Q9NP62 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GCM1Q9NP62 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
GCM1Q9NP62 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
GCM1Q9NP62 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
GCM1Q9NP62 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.86■□□□□ 0.29
GCM1Q9NP62 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GCM1Q9NP62 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms