Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK1G1Q9HCP0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CSNK1G1Q9HCP0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CSNK1G1Q9HCP0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CSNK1G1Q9HCP0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 TCF3P1-201ENST00000423021 1937 ntBASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 RPS2P55-201ENST00000397318 883 ntBASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 AC107956.1-201ENST00000494359 873 ntBASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 KRT18P16-201ENST00000510337 1294 ntBASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 AC233702.5-201ENST00000584107 538 ntBASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 AL135905.2-201ENST00000584934 1404 ntBASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G1Q9HCP0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 MIR718-201ENST00000390190 70 ntBASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CSNK1G1Q9HCP0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CSNK1G1Q9HCP0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 HTR7P1-201ENST00000538670 1336 ntBASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G1Q9HCP0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 TMEM179-206ENST00000616017 1645 ntBASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms